RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 TPST2O60704 377 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 BEST1O76090 585 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 IFNA16P05015 189 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 CKMT1AP12532 417 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 MRPS6P82932 125 aaKnown RBP15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 VMACQ2NL98 169 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 LIN54Q6MZP7 749 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 PKP4Q99569 1192 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 ZDHHC6Q9H6R6 413 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 RIMKLBQ9ULI2 386 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 ENTPD4Q9Y227 616 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 CORINQ9Y5Q5 1042 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 CITO14578 2027 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 MID1O15344 667 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 TLL1O43897 1013 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 FPGSQ05932 587 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 PROX2Q3B8N5 592 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 SHQ1Q6PI26 577 aaKnown RBP15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 CADM2Q8N3J6 435 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 RGS17Q9UGC6 210 aaPredicted RBP15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 A0A1W2PQ67 120 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 DNTTP04053 509 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 RPLP2P05387 115 aaKnown RBP15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 PFKMP08237 780 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 FDXRP22570 491 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 STOMP27105 288 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 CBLBQ13191 982 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 AKIRIN2Q53H80 203 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 PRAMEF19Q5SWL8 479 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 OR7G1Q8NGA0 311 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 GEMIN6Q8WXD5 167 aaKnown RBP15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 DEDD2Q8WXF8 326 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 UROC1Q96N76 676 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 IL12RB2Q99665 862 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 GTPBP2Q9BX10 602 aaKnown RBP15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 IL1RAPQ9NPH3 570 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 GPR83Q9NYM4 423 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 FBXO9Q9UK97 447 aaPredicted RBP15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 HCN4Q9Y3Q4 1203 aa15.54■□□□□ 0.08
CLSTN1-201ENST00000361311 A0A096LPI6 279 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 WNT9AO14904 365 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 SPAM1P38567 509 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 RPL6Q02878 288 aaKnown RBP15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 ZNF730Q6ZMV8 503 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 RGL4Q8IZJ4 473 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 CDCA5Q96FF9 252 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 SYT17Q9BSW7 474 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 ZCCHC2Q9C0B9 1178 aaKnown RBP15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 TJP1Q07157 1748 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 PDPK1O15530 556 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 MMP3P08254 477 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 ZNF81P51508 661 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 GNA13Q14344 377 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 DUSP28Q4G0W2 176 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 CCDC157Q569K6 752 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 ZNF697Q5TEC3 545 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 FBXL22Q6P050 247 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 ZNF767PQ75MW2 155 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 METTL4Q8N3J2 472 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 RFKQ969G6 155 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 IMP4Q96G21 291 aaKnown RBP15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 TMEM80Q96HE8 168 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 SLC29A3Q9BZD2 475 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 WDR6Q9NNW5 1121 aaKnown RBP15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 ABCB8Q9NUT2 735 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 FNIP2Q9P278 1114 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 GPR45Q9Y5Y3 372 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 PDHXO00330 501 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 ERAL1O75616 437 aaKnown RBP15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 JUNBP17275 347 aaPredicted RBP15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 ACVRL1P37023 503 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 HTR6P50406 440 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 SNRPD1P62314 119 aaKnown RBP15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 SCAPQ12770 1279 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 MAMDC4Q6UXC1 1216 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 RANBP10Q6VN20 620 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 ADGRD2Q7Z7M1 963 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 NEURL2Q9BR09 285 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 VPS29Q9UBQ0 182 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 TMX2-CTNND1H3BSU7 103 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 TREHO43280 583 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 SOX14O95416 240 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 EBLN1P0CF75 366 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 ARRB2P32121 409 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 RYKP34925 604 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 RPA4Q13156 261 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 FRG2Q64ET8 278 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 DHRS4L2Q6PKH6 230 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 FRG2BQ96QU4 278 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 SLC32A1Q9H598 525 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 VAPAQ9P0L0 249 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 SLAMF8Q9P0V8 285 aa15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 EVLQ9UI08 416 aaPredicted RBP15.53■□□□□ 0.08
CLSTN1-201ENST00000361311 A6NL46 340 aa15.52■□□□□ 0.08
CLSTN1-201ENST00000361311 MAFKO60675 156 aa15.52■□□□□ 0.08
CLSTN1-201ENST00000361311 MTAPQ13126 283 aa15.52■□□□□ 0.08
CLSTN1-201ENST00000361311 ADAM15Q13444 863 aa15.52■□□□□ 0.08
CLSTN1-201ENST00000361311 ABRAXAS2Q15018 415 aa15.52■□□□□ 0.08
CLSTN1-201ENST00000361311 GTDC1Q4AE62 458 aa15.52■□□□□ 0.08
CLSTN1-201ENST00000361311 TIGD5Q53EQ6 642 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms