RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 PNPOQ9NVS9 261 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 LYARQ9NX58 379 aaKnown RBP6.41□□□□□ -1.38
VPS13B-202ENST00000357162 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.41□□□□□ -1.38
VPS13B-202ENST00000357162 CACNA1SQ13698 1873 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 TRAV19A0A0A6YYK7 116 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 GLYATL1P3A0A0U1RQE8 302 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 SMIM35A0A1B0GVV1 85 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 DCDC2CA8MYV0 355 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 TLR4O00206 839 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 ATE1O95260 518 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 GRB14Q14449 540 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 NOXA1Q86UR1 476 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 COMMD2Q86X83 199 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 SPATA6LQ8N4H0 392 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 VANGL1Q8TAA9 524 aaPredicted RBP6.41□□□□□ -1.38
VPS13B-202ENST00000357162 MAPK15Q8TD08 544 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 OR2M2Q96R28 347 aa6.41□□□□□ -1.38
VPS13B-202ENST00000357162 GFM1Q96RP9 751 aaKnown RBP6.41□□□□□ -1.38
VPS13B-202ENST00000357162 PRSS51A0A1B0GVH4 220 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 ZNF14P17017 642 aaPredicted RBP6.4□□□□□ -1.38
VPS13B-202ENST00000357162 DNASE1L1P49184 302 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 RAB39AQ14964 217 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 GK5Q6ZS86 529 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 CYP4V2Q6ZWL3 525 aaPredicted RBP6.4□□□□□ -1.38
VPS13B-202ENST00000357162 CHST9Q7L1S5 443 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 C1orf216Q8TAB5 229 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 TMEM165Q9HC07 324 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 E2F8A0AVK6 867 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 MAP2K3P46734 347 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 BLOC1S1P78537 153 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 AIMP2Q13155 320 aaKnown RBP6.4□□□□□ -1.38
VPS13B-202ENST00000357162 MPPE1Q53F39 396 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 PRAMEF17Q5VTA0 474 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 CCBE1Q6UXH8 406 aaPredicted RBP6.4□□□□□ -1.38
VPS13B-202ENST00000357162 FAM109AQ8N4B1 249 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 SNAPC3Q92966 411 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 ADAM2Q99965 735 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 DOHHQ9BU89 302 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 RAB9BQ9NP90 201 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 KIAA1522Q9P206 1035 aaPredicted RBP6.4□□□□□ -1.38
VPS13B-202ENST00000357162 VPS29Q9UBQ0 182 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 TJP1Q07157 1748 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 KCNU1A8MYU2 1149 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 CKBP12277 381 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 ATP5A1P25705 553 aaKnown RBP6.4□□□□□ -1.38
VPS13B-202ENST00000357162 ICAM3P32942 547 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 GRM2Q14416 872 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 ABCA11PQ4W5N1 156 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 ADGRG2Q8IZP9 1017 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 MED12LQ86YW9 2145 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 MTM1Q13496 603 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 TLR1Q15399 786 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 LACC1Q8IV20 430 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 NAT8LQ8N9F0 302 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 OR2L5Q8NG80 312 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 GIMAP5Q96F15 307 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 SLC4A9Q96Q91 983 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 TMEM246Q9BRR3 403 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 CLEC4AQ9UMR7 237 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 CLDN24A6NM45 220 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 IFNA2P01563 188 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 INHBCP55103 352 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 INCA1Q0VD86 236 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 IRF4Q15306 451 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 DHCR24Q15392 516 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 CELF3Q5SZQ8 465 aaKnown RBP6.4□□□□□ -1.38
VPS13B-202ENST00000357162 TLDC1Q6P9B6 456 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 MBOAT1Q6ZNC8 495 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 TSEN15Q8WW01 171 aaKnown RBP6.4□□□□□ -1.38
VPS13B-202ENST00000357162 ZNF486Q96H40 463 aaPredicted RBP6.4□□□□□ -1.38
VPS13B-202ENST00000357162 KREMEN1Q96MU8 473 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 TSNAXQ99598 290 aaKnown RBP6.4□□□□□ -1.38
VPS13B-202ENST00000357162 ASPNQ9BXN1 380 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 PHPT1Q9NRX4 125 aaPredicted RBP6.4□□□□□ -1.38
VPS13B-202ENST00000357162 DHRS4L1P0CG22 281 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 CCR8P51685 355 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 CDH12P55289 794 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 RELAQ04206 551 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 ST3GAL4Q11206 333 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 KDELC1Q6UW63 502 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 TRMT11Q7Z4G4 463 aaKnown RBP6.4□□□□□ -1.38
VPS13B-202ENST00000357162 TPRA1Q86W33 373 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 SLC41A1Q8IVJ1 513 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 BBS10Q8TAM1 723 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 FATE1Q969F0 183 aa6.4□□□□□ -1.38
VPS13B-202ENST00000357162 MRPL45Q9BRJ2 306 aaKnown RBP6.4□□□□□ -1.38
VPS13B-202ENST00000357162 TOR1BO14657 336 aa6.4□□□□□ -1.39
VPS13B-202ENST00000357162 USP17L7P0C7H9 530 aa6.4□□□□□ -1.39
VPS13B-202ENST00000357162 CDH11P55287 796 aa6.4□□□□□ -1.39
VPS13B-202ENST00000357162 KLF1Q13351 362 aaPredicted RBP6.4□□□□□ -1.39
VPS13B-202ENST00000357162 CLCA4Q14CN2 919 aa6.4□□□□□ -1.39
VPS13B-202ENST00000357162 PTPN20Q4JDL3 420 aa6.4□□□□□ -1.39
VPS13B-202ENST00000357162 AGAP7PQ5VUJ5 663 aa6.4□□□□□ -1.39
VPS13B-202ENST00000357162 NCEH1Q6PIU2 408 aa6.4□□□□□ -1.39
VPS13B-202ENST00000357162 LGI2Q8N0V4 545 aa6.4□□□□□ -1.39
VPS13B-202ENST00000357162 OR1J4Q8NGS1 313 aa6.4□□□□□ -1.39
VPS13B-202ENST00000357162 OR56B4Q8NH76 319 aa6.4□□□□□ -1.39
VPS13B-202ENST00000357162 CERKQ8TCT0 537 aa6.4□□□□□ -1.39
VPS13B-202ENST00000357162 HCAR2Q8TDS4 363 aa6.4□□□□□ -1.39
VPS13B-202ENST00000357162 SNTG1Q9NSN8 517 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms