RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 ACPTQ9BZG2 426 aa17.47■□□□□ 0.39
SMARCD3-202ENST00000356800 PCDHGA2Q9Y5H1 932 aa17.47■□□□□ 0.39
SMARCD3-202ENST00000356800 PCDH15Q96QU1 1955 aa17.46■□□□□ 0.39
SMARCD3-202ENST00000356800 SERTM1A2A2V5 107 aa17.46■□□□□ 0.39
SMARCD3-202ENST00000356800 PIPSLA2A3N6 862 aa17.46■□□□□ 0.39
SMARCD3-202ENST00000356800 ANXA6P08133 673 aa17.46■□□□□ 0.39
SMARCD3-202ENST00000356800 GIMD1P0DJR0 217 aa17.46■□□□□ 0.39
SMARCD3-202ENST00000356800 CD1EP15812 388 aa17.46■□□□□ 0.39
SMARCD3-202ENST00000356800 MRPL19P49406 292 aaKnown RBP17.46■□□□□ 0.39
SMARCD3-202ENST00000356800 ZNF423Q2M1K9 1284 aa17.46■□□□□ 0.39
SMARCD3-202ENST00000356800 C6orf136Q5SQH8 315 aa17.46■□□□□ 0.39
SMARCD3-202ENST00000356800 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.46■□□□□ 0.39
SMARCD3-202ENST00000356800 OGFOD3Q6PK18 319 aa17.46■□□□□ 0.39
SMARCD3-202ENST00000356800 LAS2Q8IYD9 372 aa17.46■□□□□ 0.39
SMARCD3-202ENST00000356800 OR4K1Q8NGD4 311 aa17.46■□□□□ 0.39
SMARCD3-202ENST00000356800 RP9Q8TA86 221 aaKnown RBP17.46■□□□□ 0.39
SMARCD3-202ENST00000356800 BTBD10Q9BSF8 475 aa17.46■□□□□ 0.39
SMARCD3-202ENST00000356800 PELI2Q9HAT8 420 aa17.46■□□□□ 0.39
SMARCD3-202ENST00000356800 SLC6A20Q9NP91 592 aa17.46■□□□□ 0.39
SMARCD3-202ENST00000356800 PCDHGA11Q9Y5H2 935 aa17.46■□□□□ 0.39
SMARCD3-202ENST00000356800 PATE3B3GLJ2 98 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 H7BY64 318 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 SLC28A1O00337 649 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 PPM1DO15297 605 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 THRAP10827 490 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 FASLGP48023 281 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 ZNF33BQ06732 778 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 GRIK2Q13002 908 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 NR6A1Q15406 480 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 LPAL2Q16609 132 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 GSTA3Q16772 222 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 ATP6AP1LQ52LC2 224 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 MED27Q6P2C8 311 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 PRR23BQ6ZRT6 265 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 OR2L3Q8NG85 312 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 PRAP1Q96NZ9 151 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 MTERF1Q99551 399 aaKnown RBP17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 C1orf21Q9H246 121 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 TAS2R1Q9NYW7 299 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 CSNK1G3Q9Y6M4 447 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 OR6C74A6NCV1 312 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 ISM1B1AKI9 464 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 RGS14O43566 566 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 NRP2O60462 931 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 CFIP05156 583 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 COX4I1P13073 169 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 IDO1P14902 403 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 HOXD12P35452 270 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 ACADVLP49748 655 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 CCR8P51685 355 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 ERVK-8P63133 956 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 LAPTM5Q13571 262 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 DUOXA1Q1HG43 343 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 SMU1Q2TAY7 513 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 PAGE2BQ5JRK9 111 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 KIAA1614Q5VZ46 1190 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 KANSL1Q7Z3B3 1105 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 RBM12BQ8IXT5 1001 aaKnown RBP17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 KIF2BQ8N4N8 673 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 HUS1BQ8NHY5 278 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 TBC1D10AQ9BXI6 508 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 CAPN10Q9HC96 672 aa17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 SDR39U1Q9NRG7 319 aaPredicted RBP17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.45■□□□□ 0.38
SMARCD3-202ENST00000356800 ZNF318Q5VUA4 2279 aa17.44■□□□□ 0.38
SMARCD3-202ENST00000356800 MDC1Q14676 2089 aaKnown RBP17.44■□□□□ 0.38
SMARCD3-202ENST00000356800 B2RBV5 119 aa17.44■□□□□ 0.38
SMARCD3-202ENST00000356800 PSMD12O00232 456 aaPredicted RBP17.44■□□□□ 0.38
SMARCD3-202ENST00000356800 PCNAP12004 261 aa17.44■□□□□ 0.38
SMARCD3-202ENST00000356800 NQO1P15559 274 aaKnown RBP17.44■□□□□ 0.38
SMARCD3-202ENST00000356800 POLR2CP19387 275 aaPredicted RBP17.44■□□□□ 0.38
SMARCD3-202ENST00000356800 ARRB1P49407 418 aaPredicted RBP17.44■□□□□ 0.38
SMARCD3-202ENST00000356800 STX1BP61266 288 aa17.44■□□□□ 0.38
SMARCD3-202ENST00000356800 KCNJ2P63252 427 aa17.44■□□□□ 0.38
SMARCD3-202ENST00000356800 CSNK1G2P78368 415 aa17.44■□□□□ 0.38
SMARCD3-202ENST00000356800 REEP5Q00765 189 aa17.44■□□□□ 0.38
SMARCD3-202ENST00000356800 DDX39BQ13838 428 aaKnown RBP17.44■□□□□ 0.38
SMARCD3-202ENST00000356800 KIR2DS3Q14952 304 aa17.44■□□□□ 0.38
SMARCD3-202ENST00000356800 SF1Q15637 639 aaKnown RBP17.44■□□□□ 0.38
SMARCD3-202ENST00000356800 AP5B1Q2VPB7 878 aa17.44■□□□□ 0.38
SMARCD3-202ENST00000356800 HLA-BQ31612 363 aa17.44■□□□□ 0.38
SMARCD3-202ENST00000356800 RFTN2Q52LD8 501 aaPredicted RBP17.44■□□□□ 0.38
SMARCD3-202ENST00000356800 POU5F2Q8N7G0 328 aa17.44■□□□□ 0.38
SMARCD3-202ENST00000356800 KYQ8NBH2 561 aa17.44■□□□□ 0.38
SMARCD3-202ENST00000356800 GPR156Q8NFN8 814 aa17.44■□□□□ 0.38
SMARCD3-202ENST00000356800 OR10G6Q8NH81 332 aa17.44■□□□□ 0.38
SMARCD3-202ENST00000356800 PPP3R2Q96LZ3 170 aa17.44■□□□□ 0.38
SMARCD3-202ENST00000356800 OR2A14Q96R47 310 aa17.44■□□□□ 0.38
SMARCD3-202ENST00000356800 IL21RQ9HBE5 538 aa17.44■□□□□ 0.38
SMARCD3-202ENST00000356800 MRPS30Q9NP92 439 aaKnown RBP17.44■□□□□ 0.38
SMARCD3-202ENST00000356800 GOLGA4Q13439 2230 aaKnown RBP17.44■□□□□ 0.38
SMARCD3-202ENST00000356800 DMDP11532 3685 aa17.43■□□□□ 0.38
SMARCD3-202ENST00000356800 LOC100653049A0A140TA62 436 aa17.43■□□□□ 0.38
SMARCD3-202ENST00000356800 A0A1B0GTQ1 180 aa17.43■□□□□ 0.38
SMARCD3-202ENST00000356800 FAM221BA6H8Z2 402 aa17.43■□□□□ 0.38
SMARCD3-202ENST00000356800 MAGEB17A8MXT2 336 aa17.43■□□□□ 0.38
SMARCD3-202ENST00000356800 NPIPB8E9PQR5 432 aa17.43■□□□□ 0.38
SMARCD3-202ENST00000356800 GYG2O15488 501 aa17.43■□□□□ 0.38
SMARCD3-202ENST00000356800 GALR2O43603 387 aaPredicted RBP17.43■□□□□ 0.38
SMARCD3-202ENST00000356800 KRT34O76011 436 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms