RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 GGHQ92820 318 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 TBC1D20Q96BZ9 403 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 TINAGL1Q9GZM7 467 aaPredicted RBP15.29■□□□□ 0.04
RTN3-205ENST00000356000 RNF186Q9NXI6 227 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 REV1Q9UBZ9 1251 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 ZFR2Q9UPR6 939 aaKnown RBP15.29■□□□□ 0.04
RTN3-205ENST00000356000 A8MXK9 166 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 GSTA4O15217 222 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 CHP2O43745 196 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 ASPAP45381 313 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 CAPZA2P47755 286 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 HSF2Q03933 536 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 ADAM15Q13444 863 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 OR6B2Q6IFH4 312 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 CNTN4Q8IWV2 1026 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 PGBD5Q8N414 524 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 DNAJC22Q8N4W6 341 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 LPCAT1Q8NF37 534 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 GTF3C2Q8WUA4 911 aaPredicted RBP15.29■□□□□ 0.04
RTN3-205ENST00000356000 ZFPM2Q8WW38 1151 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 KIAA1191Q96A73 305 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 CRELD1Q96HD1 420 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 CCDC17Q96LX7 622 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 PPM1MQ96MI6 270 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 PRDM12Q9H4Q4 367 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 ZNF408Q9H9D4 720 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 MBD2Q9UBB5 411 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 NLKQ9UBE8 527 aa15.29■□□□□ 0.04
RTN3-205ENST00000356000 SH3D21A4FU49 640 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 CLCA1A8K7I4 914 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 HNRNPCL2B2RXH8 293 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 E9PQ18 207 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 AZIN1O14977 448 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 VPS4BO75351 444 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 MICAL2O94851 1124 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 FABP1P07148 127 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 HLA-EP13747 358 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 PUDPQ08623 228 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 RUNDC3AQ59EK9 446 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 KANK2Q63ZY3 851 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 SAMD7Q7Z3H4 446 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 OR2T12Q8NG77 320 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 OR52N1Q8NH53 320 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 ZBTB45Q96K62 511 aaPredicted RBP15.28■□□□□ 0.04
RTN3-205ENST00000356000 EMC7Q9NPA0 242 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 SDHAF3Q9NRP4 125 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 MAP3K20Q9NYL2 800 aaKnown RBP15.28■□□□□ 0.04
RTN3-205ENST00000356000 COPZ2Q9P299 210 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 KCNK7Q9Y2U2 307 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 FAM240BA0A1B0GVZ2 78 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 SIGLEC6O43699 453 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 HCN1O60741 890 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 CLCN3P51790 818 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 FOXA1P55317 472 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.28■□□□□ 0.04
RTN3-205ENST00000356000 DSC1Q08554 894 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 LGALSLQ3ZCW2 172 aaPredicted RBP15.28■□□□□ 0.04
RTN3-205ENST00000356000 CHMP1BQ7LBR1 199 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 PID1Q7Z2X4 250 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 ZNF548Q8NEK5 533 aaPredicted RBP15.28■□□□□ 0.04
RTN3-205ENST00000356000 SLC5A11Q8WWX8 675 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 LPPQ93052 612 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 MAGEB5Q9BZ81 275 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 BRINP2Q9C0B6 783 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 MIXL1Q9H2W2 232 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 PDLIM7Q9NR12 457 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 ACTR10Q9NZ32 417 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 CTSFQ9UBX1 484 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 TMX2Q9Y320 296 aa15.28■□□□□ 0.04
RTN3-205ENST00000356000 UTRNP46939 3433 aa15.27■□□□□ 0.04
RTN3-205ENST00000356000 FAM234BA2RU67 622 aa15.27■□□□□ 0.04
RTN3-205ENST00000356000 CBX4O00257 560 aa15.27■□□□□ 0.04
RTN3-205ENST00000356000 LINC00032P0C843 101 aa15.27■□□□□ 0.04
RTN3-205ENST00000356000 PRR35P0CG20 571 aa15.27■□□□□ 0.04
RTN3-205ENST00000356000 HSMCR30P0CW71 290 aa15.27■□□□□ 0.04
RTN3-205ENST00000356000 RAB13P51153 203 aa15.27■□□□□ 0.04
RTN3-205ENST00000356000 RPP38P78345 283 aaKnown RBP15.27■□□□□ 0.04
RTN3-205ENST00000356000 NFIAQ12857 509 aa15.27■□□□□ 0.04
RTN3-205ENST00000356000 PYDC2Q56P42 97 aa15.27■□□□□ 0.04
RTN3-205ENST00000356000 USP45Q70EL2 814 aa15.27■□□□□ 0.04
RTN3-205ENST00000356000 ZNF367Q7RTV3 350 aa15.27■□□□□ 0.04
RTN3-205ENST00000356000 GPR155Q7Z3F1 870 aa15.27■□□□□ 0.04
RTN3-205ENST00000356000 RNF135Q8IUD6 432 aa15.27■□□□□ 0.04
RTN3-205ENST00000356000 DENND6AQ8IWF6 608 aa15.27■□□□□ 0.04
RTN3-205ENST00000356000 ZBED6CLQ96FA7 236 aaPredicted RBP15.27■□□□□ 0.04
RTN3-205ENST00000356000 GMCL1Q96IK5 515 aa15.27■□□□□ 0.04
RTN3-205ENST00000356000 ABCB9Q9NP78 766 aa15.27■□□□□ 0.04
RTN3-205ENST00000356000 SPASTQ9UBP0 616 aa15.27■□□□□ 0.04
RTN3-205ENST00000356000 ABCG2Q9UNQ0 655 aa15.27■□□□□ 0.04
RTN3-205ENST00000356000 SCN9AQ15858 1988 aa15.27■□□□□ 0.03
RTN3-205ENST00000356000 WASH4PA8MWX3 477 aa15.27■□□□□ 0.03
RTN3-205ENST00000356000 H0YCG3 227 aa15.27■□□□□ 0.03
RTN3-205ENST00000356000 APOL3O95236 402 aa15.27■□□□□ 0.03
RTN3-205ENST00000356000 PLATP00750 562 aa15.27■□□□□ 0.03
RTN3-205ENST00000356000 LTA4HP09960 611 aaKnown RBP15.27■□□□□ 0.03
RTN3-205ENST00000356000 TSPAN19P0C672 248 aa15.27■□□□□ 0.03
RTN3-205ENST00000356000 HK3P52790 923 aa15.27■□□□□ 0.03
RTN3-205ENST00000356000 POU4F1Q01851 419 aa15.27■□□□□ 0.03
RTN3-205ENST00000356000 CTBP1Q13363 440 aa15.27■□□□□ 0.03
RTN3-205ENST00000356000 FCN2Q15485 313 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms