RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 FAM170BA6NMN3 283 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 SMAD9O15198 467 aaKnown RBP14.51□□□□□ -0.09
LMX1B-201ENST00000355497 NR2C1P13056 603 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 TUBG1P23258 451 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 GLP1RP43220 463 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 PSMA6P60900 246 aaKnown RBP14.51□□□□□ -0.09
LMX1B-201ENST00000355497 PLGLB1Q02325 96 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 GRIK5Q16478 980 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 ACSBG2Q5FVE4 666 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 AADACL4Q5VUY2 407 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 OR2T5Q6IEZ7 315 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 OR52E4Q8NGH9 312 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 OR2T29Q8NH02 315 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 SUN3Q8TAQ9 357 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 SDHAF3Q9NRP4 125 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 ABCB8Q9NUT2 735 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 IL36AQ9UHA7 158 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 CDC14AQ9UNH5 594 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 LOC100130705A0A1B0GUX0 176 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 SCDO00767 359 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 CDRT1O95170 752 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 HLA-DPB1P04440 258 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 HCKP08631 526 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 CDKN1CP49918 316 aaPredicted RBP14.51□□□□□ -0.09
LMX1B-201ENST00000355497 CD47Q08722 323 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 SEC23BQ15437 767 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 CD300LFQ8TDQ1 290 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 EFCAB11Q9BUY7 163 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 OSBPL7Q9BZF2 842 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 ZIM2Q9NZV7 527 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 A0A0G2JN53 185 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 TREHO43280 583 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 ATP6V1G1O75348 118 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 CAPZA1P52907 286 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 NADK2Q4G0N4 442 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 TMED4Q7Z7H5 227 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 TIGD4Q8IY51 512 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 ZSCAN4Q8NAM6 433 aaPredicted RBP14.51□□□□□ -0.09
LMX1B-201ENST00000355497 CMTM7Q96FZ5 175 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 SEC61A2Q9H9S3 476 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 MRPS17Q9Y2R5 130 aaKnown RBP14.51□□□□□ -0.09
LMX1B-201ENST00000355497 ZNF536O15090 1300 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 AXIN1O15169 862 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 TGFB1P01137 390 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 NDUFS1P28331 727 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 HOXA10P31260 410 aaPredicted RBP14.51□□□□□ -0.09
LMX1B-201ENST00000355497 BNIP3Q12983 259 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 PLA2G15Q8NCC3 412 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 GALNT6Q8NCL4 622 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 SIRPGQ9P1W8 387 aa14.51□□□□□ -0.09
LMX1B-201ENST00000355497 FARSAQ9Y285 508 aaKnown RBP14.51□□□□□ -0.09
LMX1B-201ENST00000355497 KLRG2A4D1S0 409 aaPredicted RBP14.5□□□□□ -0.09
LMX1B-201ENST00000355497 CSKP41240 450 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 ARSJQ5FYB0 599 aaPredicted RBP14.5□□□□□ -0.09
LMX1B-201ENST00000355497 LRRC73Q5JTD7 316 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 PRAMEF14Q5SWL7 426 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 PRAMEF13Q5VWM6 474 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 KCTD9Q7L273 389 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 THEM6Q8WUY1 208 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 EBF2Q9HAK2 575 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 ZDHHC3Q9NYG2 299 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 LMTK2Q8IWU2 1503 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 A8MUA0 341 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 ECI2O75521 394 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 OAZ2O95190 189 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 GSTT2P0CG29 244 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 MAPK3P27361 379 aaPredicted RBP14.5□□□□□ -0.09
LMX1B-201ENST00000355497 GPR33Q49SQ1 333 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 NFKBIDQ8NI38 313 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 WFIKKN2Q8TEU8 576 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 CYP2S1Q96SQ9 504 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 PKP4Q99569 1192 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 SLC5A7Q9GZV3 580 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 AKTIPQ9H8T0 292 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 NDUFS4O43181 175 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 OPN1SWP03999 348 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 CHRNA4P43681 627 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 CDK10Q15131 360 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 VARS2Q5ST30 1063 aaKnown RBP14.5□□□□□ -0.09
LMX1B-201ENST00000355497 PHC2Q8IXK0 858 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 OR5J2Q8NH18 312 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 TMEM80Q96HE8 168 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 CGREF1Q99674 301 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 TAS2R1Q9NYW7 299 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 HTR3EA5X5Y0 456 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 HAS3O00219 553 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 LCN1P31025 176 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 GNG2P59768 71 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 DEFB115Q30KQ5 88 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 OR4F3Q6IEY1 312 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 UBE2Q1Q7Z7E8 422 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 KLK6Q92876 244 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 FCRL5Q96RD9 977 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 WDR26Q9H7D7 661 aa14.5□□□□□ -0.09
LMX1B-201ENST00000355497 WNT9AO14904 365 aa14.49□□□□□ -0.09
LMX1B-201ENST00000355497 HERV-K104P61576 105 aa14.49□□□□□ -0.09
LMX1B-201ENST00000355497 S100A16Q96FQ6 103 aaKnown RBP14.49□□□□□ -0.09
LMX1B-201ENST00000355497 RIOK2Q9BVS4 552 aaKnown RBP14.49□□□□□ -0.09
LMX1B-201ENST00000355497 ITM2CQ9NQX7 267 aa14.49□□□□□ -0.09
LMX1B-201ENST00000355497 PARPBPQ9NWS1 579 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms