RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 UPK3BL1B0FP48 263 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 UPK3BL2E5RIL1 263 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 PTGES3LE9PB15 166 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 OR7A17O14581 309 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 NARSO43776 548 aaKnown RBP8.34□□□□□ -1.07
TRIM55-204ENST00000353317 VPS26AO75436 327 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 KATNA1O75449 491 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 PCMT1P22061 227 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 PRKACGP22612 351 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 JAK1P23458 1154 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 CLCN7P51798 805 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 TPD52P55327 224 aaPredicted RBP8.34□□□□□ -1.07
TRIM55-204ENST00000353317 ST8SIA6P61647 398 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 BRAT1Q6PJG6 821 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 SPESP1Q6UW49 350 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 LIPIQ6XZB0 460 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 SNX20Q7Z614 316 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 TMEM179BQ7Z7N9 219 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 TMCO5AQ8N6Q1 288 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 ZNF548Q8NEK5 533 aaPredicted RBP8.34□□□□□ -1.07
TRIM55-204ENST00000353317 OR4F6Q8NGB9 312 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 MUL1Q969V5 352 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 CCDC138Q96M89 665 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 THUMPD3Q9BV44 507 aaKnown RBP8.34□□□□□ -1.07
TRIM55-204ENST00000353317 SARS2Q9NP81 518 aaKnown RBP8.34□□□□□ -1.07
TRIM55-204ENST00000353317 EXD2Q9NVH0 621 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 CD207Q9UJ71 328 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 TSR3Q9UJK0 312 aaKnown RBP8.34□□□□□ -1.07
TRIM55-204ENST00000353317 LOC100130705A0A1B0GUX0 176 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 K7ESM1 405 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 SLC1A7O00341 560 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 UGT2B11O75310 529 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 GMNNO75496 209 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 PRKD3O94806 890 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 CD72P21854 359 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 ACRV1P26436 265 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 DRD3P35462 400 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 TIE1P35590 1138 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 SPAM1P38567 509 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 MMP12P39900 470 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 GP2P55259 537 aaKnown RBP8.34□□□□□ -1.07
TRIM55-204ENST00000353317 EIF4HQ15056 248 aaKnown RBP8.34□□□□□ -1.07
TRIM55-204ENST00000353317 NCCRP1Q6ZVX7 275 aaPredicted RBP8.34□□□□□ -1.07
TRIM55-204ENST00000353317 TECPR1Q7Z6L1 1165 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 ZNF555Q8NEP9 628 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 GTF2H4Q92759 462 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 RHBDF1Q96CC6 855 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 SLC47A1Q96FL8 570 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 TBCDQ9BTW9 1192 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 KCNK12Q9HB15 430 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 ENPP5Q9UJA9 477 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 STON1Q9Y6Q2 735 aa8.34□□□□□ -1.07
TRIM55-204ENST00000353317 EDDM13A0A1B0GTR0 161 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 CLDN25C9JDP6 229 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 GNGT2O14610 69 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 TOR1BO14657 336 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 SGTAO43765 313 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 MAN1A2O60476 641 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 EGFP01133 1207 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 VIPR1P32241 457 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 GGT5P36269 586 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 HALP42357 657 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 TTPAP49638 278 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 RAD23AP54725 363 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 GABARAPL2P60520 117 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 EPS8Q12929 822 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 ENPP2Q13822 863 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 OXA1LQ15070 435 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 TRIM16LQ309B1 348 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 FAM174BQ3ZCQ3 159 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 DNAJC14Q6Y2X3 702 aaPredicted RBP8.33□□□□□ -1.08
TRIM55-204ENST00000353317 GOLGA7Q7Z5G4 137 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 SNX29P2Q8IUI4 249 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 MSRB3Q8IXL7 192 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 NXPE1Q8N323 547 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 SLC44A3Q8N4M1 653 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 AADATQ8N5Z0 425 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 SLC13A3Q8WWT9 602 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 TAMM41Q96BW9 452 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 ITCHQ96J02 903 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 ALPK1Q96QP1 1244 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 NODALQ96S42 347 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 RBM4BQ9BQ04 359 aaKnown RBP8.33□□□□□ -1.08
TRIM55-204ENST00000353317 RBM4Q9BWF3 364 aaKnown RBP8.33□□□□□ -1.08
TRIM55-204ENST00000353317 ACTR8Q9H981 624 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 SLC25A37Q9NYZ2 338 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 USE1Q9NZ43 259 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 DKK3Q9UBP4 350 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 CCL27Q9Y4X3 112 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 U3KQV3 271 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 KRBA1A5PL33 1030 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 E5RI56 91 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 AREL1O15033 823 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 GSTA4O15217 222 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 MBTPS2O43462 519 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 XPNPEP2O43895 674 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 HS6ST1O60243 411 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 SOD1P00441 154 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 ITIH1P19827 911 aa8.33□□□□□ -1.08
TRIM55-204ENST00000353317 CTHP32929 405 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms