RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 ZNF300Q96RE9 604 aaPredicted RBP17.52■□□□□ 0.4
PTP4A3-202ENST00000349124 TMEM175Q9BSA9 504 aa17.52■□□□□ 0.4
PTP4A3-202ENST00000349124 ACOT13Q9NPJ3 140 aa17.52■□□□□ 0.4
PTP4A3-202ENST00000349124 KRT84Q9NSB2 600 aa17.52■□□□□ 0.4
PTP4A3-202ENST00000349124 TPRKBQ9Y3C4 175 aa17.52■□□□□ 0.4
PTP4A3-202ENST00000349124 ETHE1O95571 254 aa17.52■□□□□ 0.39
PTP4A3-202ENST00000349124 ACPPP15309 386 aa17.52■□□□□ 0.39
PTP4A3-202ENST00000349124 JUNDP17535 347 aa17.52■□□□□ 0.39
PTP4A3-202ENST00000349124 C21orf33P30042 268 aaPredicted RBP17.52■□□□□ 0.39
PTP4A3-202ENST00000349124 ARHGDIAP52565 204 aa17.52■□□□□ 0.39
PTP4A3-202ENST00000349124 PFN3P60673 137 aa17.52■□□□□ 0.39
PTP4A3-202ENST00000349124 IL18R1Q13478 541 aa17.52■□□□□ 0.39
PTP4A3-202ENST00000349124 CCSMST1Q4G0I0 132 aa17.52■□□□□ 0.39
PTP4A3-202ENST00000349124 PAGE2Q7Z2X7 111 aa17.52■□□□□ 0.39
PTP4A3-202ENST00000349124 SERPINA11Q86U17 422 aa17.52■□□□□ 0.39
PTP4A3-202ENST00000349124 CMTM8Q8IZV2 173 aa17.52■□□□□ 0.39
PTP4A3-202ENST00000349124 MFSD4AQ8N468 514 aa17.52■□□□□ 0.39
PTP4A3-202ENST00000349124 LILRA3Q8N6C8 439 aaPredicted RBP17.52■□□□□ 0.39
PTP4A3-202ENST00000349124 L3MBTL4Q8NA19 623 aa17.52■□□□□ 0.39
PTP4A3-202ENST00000349124 SCRN2Q96FV2 425 aa17.52■□□□□ 0.39
PTP4A3-202ENST00000349124 HHIPQ96QV1 700 aa17.52■□□□□ 0.39
PTP4A3-202ENST00000349124 HMG20AQ9NP66 347 aa17.52■□□□□ 0.39
PTP4A3-202ENST00000349124 SACM1LQ9NTJ5 587 aa17.52■□□□□ 0.39
PTP4A3-202ENST00000349124 THUMPD1Q9NXG2 353 aaKnown RBP17.52■□□□□ 0.39
PTP4A3-202ENST00000349124 SLCO3A1Q9UIG8 710 aa17.52■□□□□ 0.39
PTP4A3-202ENST00000349124 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.52■□□□□ 0.399e-13■■■■□ 21.2
PTP4A3-202ENST00000349124 BACE2Q9Y5Z0 518 aa17.52■□□□□ 0.39
PTP4A3-202ENST00000349124 MAGEB17A8MXT2 336 aa17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 SERPINA4P29622 427 aa17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 TM4SF4P48230 202 aa17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 ABRQ12979 859 aa17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 ACOX1Q15067 660 aa17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 PLEKHG6Q3KR16 790 aa17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 CYP27C1Q4G0S4 372 aa17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 TPRG1Q6ZUI0 275 aa17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 HS6ST3Q8IZP7 471 aa17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 DYNC2LI1Q8TCX1 351 aa17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 NELL1Q92832 810 aa17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 DNASE1L2Q92874 299 aa17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 KCNC2Q96PR1 638 aa17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 HERC2P3Q9BVR0 1158 aa17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 MROQ9BYG7 248 aa17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 SCN3BQ9NY72 215 aa17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 CFAP97Q9P2B7 532 aa17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 KIF17Q9P2E2 1029 aa17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 AP3M1Q9Y2T2 418 aa17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 EFEMP2O95967 443 aa17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 IGSF6O95976 241 aa17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 FPR1P21462 350 aa17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 IQCCQ4KMZ1 466 aa17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 SYT6Q5T7P8 510 aaPredicted RBP17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 DSG4Q86SJ6 1040 aa17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 ADCK1Q86TW2 530 aa17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 CADM3Q8N126 398 aa17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 CBARPQ8N350 705 aaPredicted RBP17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 SETD9Q8NE22 299 aa17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 APH1BQ8WW43 257 aa17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 LGALS12Q96DT0 336 aa17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 ZDHHC6Q9H6R6 413 aa17.51■□□□□ 0.39
PTP4A3-202ENST00000349124 OR2AG2A6NM03 316 aa17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 RGS10O43665 173 aa17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 EPN2O95208 641 aa17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 SEMG1P04279 462 aa17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 SRCP12931 536 aa17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 GPX2P18283 190 aa17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 RAB15P59190 212 aa17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 IRF8Q02556 426 aa17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 VEPH1Q14D04 833 aa17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 INAVAQ3KP66 663 aa17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 LRRC70Q7Z2Q7 622 aa17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 CHST14Q8NCH0 376 aa17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 DNAJB8Q8NHS0 232 aa17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 TPT1P8Q9HAU6 139 aa17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 IL21Q9HBE4 155 aa17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 ABCB8Q9NUT2 735 aa17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 DNAJC11Q9NVH1 559 aa17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 KPNA4O00629 521 aaPredicted RBP17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 SOCS5O75159 536 aa17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 OPN1SWP03999 348 aa17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 CKMP06732 381 aa17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 ABCB1P08183 1280 aaPredicted RBP17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 C1SP09871 688 aa17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 CD36P16671 472 aa17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 MTAPQ13126 283 aa17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 SPOUT1Q5T280 376 aaKnown RBP17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 DPY19L3Q6ZPD9 716 aa17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 PROX1Q92786 737 aa17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 VMP1Q96GC9 406 aa17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 SUV39H2Q9H5I1 410 aa17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 B4GALT6Q9UBX8 382 aa17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 ABT1Q9ULW3 272 aaKnown RBP17.5■□□□□ 0.39
PTP4A3-202ENST00000349124 GABRR3A8MPY1 467 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 TMEM229AB2RXF0 380 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 E7EQ34 232 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 OR56A5P0C7T3 313 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 CBSLP0DN79 551 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 PRPS1L1P21108 318 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 CBSP35520 551 aa17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 ST13P50502 369 aaKnown RBP17.49■□□□□ 0.39
PTP4A3-202ENST00000349124 NPRL3Q12980 569 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms