RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 GTPBP3Q969Y2 492 aaKnown RBP17.29■□□□□ 0.36
APP-202ENST00000348990 TRIB3Q96RU7 358 aa17.29■□□□□ 0.36
APP-202ENST00000348990 ADAM2Q99965 735 aa17.29■□□□□ 0.36
APP-202ENST00000348990 CLCA1A8K7I4 914 aa17.29■□□□□ 0.36
APP-202ENST00000348990 GFRA2O00451 464 aa17.29■□□□□ 0.36
APP-202ENST00000348990 PRAMEF1O95521 474 aa17.29■□□□□ 0.36
APP-202ENST00000348990 NUDT7P0C024 238 aa17.29■□□□□ 0.36
APP-202ENST00000348990 DGKAP23743 735 aa17.29■□□□□ 0.36
APP-202ENST00000348990 RGS6P49758 472 aa17.29■□□□□ 0.36
APP-202ENST00000348990 PRKCDQ05655 676 aa17.29■□□□□ 0.36
APP-202ENST00000348990 TUSC3Q13454 348 aa17.29■□□□□ 0.36
APP-202ENST00000348990 ARTNQ5T4W7 220 aa17.29■□□□□ 0.36
APP-202ENST00000348990 ZNF683Q8IZ20 524 aa17.29■□□□□ 0.36
APP-202ENST00000348990 CLECL1Q8IZS7 167 aa17.29■□□□□ 0.36
APP-202ENST00000348990 STK40Q8N2I9 435 aa17.29■□□□□ 0.36
APP-202ENST00000348990 WDR36Q8NI36 951 aaKnown RBP17.29■□□□□ 0.36
APP-202ENST00000348990 LKAAEAR1Q8TD35 194 aa17.29■□□□□ 0.36
APP-202ENST00000348990 APH1BQ8WW43 257 aa17.29■□□□□ 0.36
APP-202ENST00000348990 TM6SF2Q9BZW4 377 aa17.29■□□□□ 0.36
APP-202ENST00000348990 IRF2BPLQ9H1B7 796 aa17.29■□□□□ 0.36
APP-202ENST00000348990 ZNF556Q9HAH1 456 aa17.29■□□□□ 0.36
APP-202ENST00000348990 TRPV5Q9NQA5 729 aa17.29■□□□□ 0.36
APP-202ENST00000348990 DYRK4Q9NR20 520 aa17.29■□□□□ 0.36
APP-202ENST00000348990 SNTG1Q9NSN8 517 aa17.29■□□□□ 0.36
APP-202ENST00000348990 MS4A12Q9NXJ0 267 aa17.29■□□□□ 0.36
APP-202ENST00000348990 ERVW-1Q9UQF0 538 aa17.29■□□□□ 0.36
APP-202ENST00000348990 SCML2Q9UQR0 700 aa17.29■□□□□ 0.36
APP-202ENST00000348990 CCL15-CCL14A0A0B4J2E2 113 aa17.28■□□□□ 0.36
APP-202ENST00000348990 PRLP01236 227 aa17.28■□□□□ 0.36
APP-202ENST00000348990 HTR3AP46098 478 aa17.28■□□□□ 0.36
APP-202ENST00000348990 RUNX1T1Q06455 604 aa17.28■□□□□ 0.36
APP-202ENST00000348990 SF1Q15637 639 aaKnown RBP17.28■□□□□ 0.36
APP-202ENST00000348990 CCL15Q16663 113 aa17.28■□□□□ 0.36
APP-202ENST00000348990 C10orf62Q5T681 223 aaPredicted RBP17.28■□□□□ 0.36
APP-202ENST00000348990 ZNF551Q7Z340 670 aaPredicted RBP17.28■□□□□ 0.36
APP-202ENST00000348990 PLEKHH3Q7Z736 793 aa17.28■□□□□ 0.36
APP-202ENST00000348990 ST13P5Q8NFI4 369 aaPredicted RBP17.28■□□□□ 0.36
APP-202ENST00000348990 OR6F1Q8NGZ6 308 aa17.28■□□□□ 0.36
APP-202ENST00000348990 PSKH2Q96QS6 385 aa17.28■□□□□ 0.36
APP-202ENST00000348990 FBXL12Q9NXK8 326 aa17.28■□□□□ 0.36
APP-202ENST00000348990 CCL27Q9Y4X3 112 aa17.28■□□□□ 0.36
APP-202ENST00000348990 TRPV2Q9Y5S1 764 aa17.28■□□□□ 0.36
APP-202ENST00000348990 GOLGA4Q13439 2230 aaKnown RBP17.28■□□□□ 0.36
APP-202ENST00000348990 MAGEB17A8MXT2 336 aa17.28■□□□□ 0.36
APP-202ENST00000348990 H3BM21 787 aa17.28■□□□□ 0.36
APP-202ENST00000348990 UGT2B10P36537 528 aa17.28■□□□□ 0.36
APP-202ENST00000348990 THPOP40225 353 aa17.28■□□□□ 0.36
APP-202ENST00000348990 SPIBQ01892 262 aa17.28■□□□□ 0.36
APP-202ENST00000348990 DENND1CQ8IV53 801 aa17.28■□□□□ 0.36
APP-202ENST00000348990 VANGL1Q8TAA9 524 aaPredicted RBP17.28■□□□□ 0.36
APP-202ENST00000348990 PIK3R3Q92569 461 aa17.28■□□□□ 0.36
APP-202ENST00000348990 TADA1Q96BN2 335 aa17.28■□□□□ 0.36
APP-202ENST00000348990 CLSTN3Q9BQT9 956 aa17.28■□□□□ 0.36
APP-202ENST00000348990 NMRK2Q9NPI5 230 aa17.28■□□□□ 0.36
APP-202ENST00000348990 SERHLQ9NQF3 203 aa17.28■□□□□ 0.36
APP-202ENST00000348990 PSORS1C1Q9UIG5 152 aa17.28■□□□□ 0.36
APP-202ENST00000348990 PPT2Q9UMR5 302 aa17.28■□□□□ 0.36
APP-202ENST00000348990 ADORA3P0DMS8 318 aa17.28■□□□□ 0.36
APP-202ENST00000348990 ITPKAP23677 461 aa17.28■□□□□ 0.36
APP-202ENST00000348990 HOXD11P31277 338 aaPredicted RBP17.28■□□□□ 0.36
APP-202ENST00000348990 CPT1AP50416 773 aa17.28■□□□□ 0.36
APP-202ENST00000348990 CLDN8P56748 225 aa17.28■□□□□ 0.36
APP-202ENST00000348990 STARD3Q14849 445 aa17.28■□□□□ 0.36
APP-202ENST00000348990 SLC5A8Q8N695 610 aa17.28■□□□□ 0.36
APP-202ENST00000348990 KIAA1958Q8N8K9 716 aa17.28■□□□□ 0.36
APP-202ENST00000348990 APIPQ96GX9 242 aa17.28■□□□□ 0.36
APP-202ENST00000348990 COL21A1Q96P44 957 aa17.28■□□□□ 0.36
APP-202ENST00000348990 OR5M11Q96RB7 305 aa17.28■□□□□ 0.36
APP-202ENST00000348990 DKK3Q9UBP4 350 aa17.28■□□□□ 0.36
APP-202ENST00000348990 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.27■□□□□ 0.36
APP-202ENST00000348990 SMIM30A4D0T7 59 aa17.27■□□□□ 0.36
APP-202ENST00000348990 PRAMEF12O95522 483 aa17.27■□□□□ 0.36
APP-202ENST00000348990 CDK1P06493 297 aa17.27■□□□□ 0.36
APP-202ENST00000348990 TNFSF8P32971 234 aa17.27■□□□□ 0.36
APP-202ENST00000348990 GJA5P36382 358 aa17.27■□□□□ 0.36
APP-202ENST00000348990 ZNF177Q13360 481 aaPredicted RBP17.27■□□□□ 0.36
APP-202ENST00000348990 GNASQ5JWF2 1037 aa17.27■□□□□ 0.36
APP-202ENST00000348990 ZSWIM9Q86XI8 627 aa17.27■□□□□ 0.36
APP-202ENST00000348990 CALHM3Q86XJ0 350 aa17.27■□□□□ 0.36
APP-202ENST00000348990 GPSM3Q9Y4H4 160 aa17.27■□□□□ 0.36
APP-202ENST00000348990 CHRNB1P11230 501 aa17.27■□□□□ 0.35
APP-202ENST00000348990 HOXD9P28356 352 aaPredicted RBP17.27■□□□□ 0.35
APP-202ENST00000348990 MAPKAPK2P49137 400 aa17.27■□□□□ 0.35
APP-202ENST00000348990 CACNG1Q06432 222 aa17.27■□□□□ 0.35
APP-202ENST00000348990 CAMK2BQ13554 666 aa17.27■□□□□ 0.35
APP-202ENST00000348990 TBCEQ15813 527 aaPredicted RBP17.27■□□□□ 0.35
APP-202ENST00000348990 CCDC58Q4VC31 144 aa17.27■□□□□ 0.35
APP-202ENST00000348990 ATXN7L2Q5T6C5 722 aaPredicted RBP17.27■□□□□ 0.35
APP-202ENST00000348990 CXCL17Q6UXB2 119 aa17.27■□□□□ 0.35
APP-202ENST00000348990 DNAJC22Q8N4W6 341 aa17.27■□□□□ 0.35
APP-202ENST00000348990 OR10G2Q8NGC3 310 aa17.27■□□□□ 0.35
APP-202ENST00000348990 MGME1Q9BQP7 344 aa17.27■□□□□ 0.35
APP-202ENST00000348990 NUFIP1Q9UHK0 495 aaKnown RBP17.27■□□□□ 0.35
APP-202ENST00000348990 PADI3Q9ULW8 664 aa17.27■□□□□ 0.35
APP-202ENST00000348990 PAPPA2Q9BXP8 1791 aa17.27■□□□□ 0.35
APP-202ENST00000348990 ANXA5P08758 320 aa17.26■□□□□ 0.35
APP-202ENST00000348990 SDC1P18827 310 aa17.26■□□□□ 0.35
APP-202ENST00000348990 CSNK2BP67870 215 aa17.26■□□□□ 0.35
APP-202ENST00000348990 HSPA14Q0VDF9 509 aa17.26■□□□□ 0.35
APP-202ENST00000348990 NADSYN1Q6IA69 706 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms