RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 CPPED1Q9BRF8 314 aaPredicted RBP10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 BEX2Q9BXY8 128 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 POLR1EQ9GZS1 481 aaKnown RBP10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 TIGARQ9NQ88 270 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 UXTQ9UBK9 157 aaPredicted RBP10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 POLR3HQ9Y535 204 aaPredicted RBP10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 COMMD10Q9Y6G5 202 aa10.03□□□□□ -0.8
CHRNA1-202ENST00000348749 MICAL3Q7RTP6 2002 aa10.02□□□□□ -0.8
CHRNA1-202ENST00000348749 EFCAB10A6NFE3 127 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 ADM5C9JUS6 153 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 TNFRSF10BO14763 440 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 DPM1O60762 260 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 PDE9AO76083 593 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 CCNDBP1O95273 360 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 IL6P05231 212 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 CCNYL3P0C7X3 344 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 NCF1P14598 390 aaPredicted RBP10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 GGT2P36268 569 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 TALDO1P37837 337 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 AGTR2P50052 363 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 SRP54P61011 504 aaKnown RBP10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 PSPHP78330 225 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 DSC2Q02487 901 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 SLC10A7Q0GE19 358 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 SEMA3AQ14563 771 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 NR6A1Q15406 480 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 TRIM60Q495X7 471 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 TIGD5Q53EQ6 642 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 ZMAT1Q5H9K5 638 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 C10orf62Q5T681 223 aaPredicted RBP10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 FAM171A1Q5VUB5 890 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 LAMTOR1Q6IAA8 161 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 AFTPHQ6ULP2 937 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 ZNF782Q6ZMW2 699 aaPredicted RBP10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 GCNT7Q6ZNI0 430 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 MRPL10Q7Z7H8 261 aaKnown RBP10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 ATCAYQ86WG3 371 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 CARNMT1Q8N4J0 409 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 ATG16L2Q8NAA4 619 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 OR4M2Q8NGB6 313 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 GPR151Q8TDV0 419 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 SH3KBP1Q96B97 665 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 FAM120BQ96EK7 910 aaKnown RBP10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 HMCESQ96FZ2 354 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 UROC1Q96N76 676 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 FAM105AQ9NUU6 356 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 NLE1Q9NVX2 485 aaPredicted RBP10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 TIMM13Q9Y5L4 95 aaPredicted RBP10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 SNX8Q9Y5X2 465 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 PLXNA3P51805 1871 aa10.02□□□□□ -0.81
CHRNA1-202ENST00000348749 C17orf102A2RUQ5 167 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 OR51F1A6NGY5 319 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 MYO1GB0I1T2 1018 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 E2F3O00716 465 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 WNT9AO14904 365 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 PER2O15055 1255 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 TREHO43280 583 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 AKR7A2O43488 359 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 CYP7B1O75881 506 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 RHOBTB1O94844 696 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 RPLP2P05387 115 aaKnown RBP10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 TYMPP19971 482 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 ERVPABLB-1P60509 514 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 PCDH1Q08174 1060 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 QPRTQ15274 297 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 TSNQ15631 228 aaKnown RBP10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 AP5B1Q2VPB7 878 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 GLYR1Q49A26 553 aaPredicted RBP10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 INO80DQ53TQ3 878 aaPredicted RBP10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 LRIF1Q5T3J3 769 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 NDUFAF5Q5TEU4 345 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 LRRC66Q68CR7 880 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 CCDC149Q6ZUS6 474 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 SCD5Q86SK9 330 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 MON1AQ86VX9 555 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 PGBD3Q8N328 593 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 UBASH3BQ8TF42 649 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 NUDT8Q8WV74 236 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 CHTF18Q8WVB6 975 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 BTN2A2Q8WVV5 523 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 DNAJA4Q8WW22 397 aaPredicted RBP10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 CCDC120Q96HB5 630 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 PPP3R2Q96LZ3 170 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 C11orf54Q9H0W9 315 aaPredicted RBP10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 TNKS2Q9H2K2 1166 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 ABCB8Q9NUT2 735 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 MIOSQ9NXC5 875 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 ING3Q9NXR8 418 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 GALPQ9UBC7 116 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 TNFRSF10DQ9UBN6 386 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 IKZF3Q9UKT9 509 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 TRIP12Q14669 1992 aaPredicted RBP10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 MYO16Q9Y6X6 1858 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 IQCMA0A1B0GVH7 501 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 DRGXA6NNA5 263 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 E5RI56 91 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 J3KR12 359 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 M0QZ92 97 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 ENPP3O14638 875 aa10.01□□□□□ -0.81
CHRNA1-202ENST00000348749 SLC9A3R1O14745 358 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms