RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 KLF15Q9UIH9 416 aa10.83□□□□□ -0.68
SMARCE1-202ENST00000348513 PRELID3BQ9Y3B1 194 aa10.83□□□□□ -0.68
SMARCE1-202ENST00000348513 SAMHD1Q9Y3Z3 626 aaKnown RBP10.83□□□□□ -0.68
SMARCE1-202ENST00000348513 PRMT5O14744 637 aaPredicted RBP10.83□□□□□ -0.68
SMARCE1-202ENST00000348513 SLC31A1O15431 190 aa10.83□□□□□ -0.68
SMARCE1-202ENST00000348513 GCATO75600 419 aa10.83□□□□□ -0.68
SMARCE1-202ENST00000348513 VIPP01282 170 aa10.83□□□□□ -0.68
SMARCE1-202ENST00000348513 PRKCGP05129 697 aa10.83□□□□□ -0.68
SMARCE1-202ENST00000348513 HNF1AP20823 631 aa10.83□□□□□ -0.68
SMARCE1-202ENST00000348513 NAE1Q13564 534 aa10.83□□□□□ -0.68
SMARCE1-202ENST00000348513 HGSNATQ68CP4 663 aa10.83□□□□□ -0.68
SMARCE1-202ENST00000348513 CHSY3Q70JA7 882 aa10.83□□□□□ -0.68
SMARCE1-202ENST00000348513 PTPN18Q99952 460 aa10.83□□□□□ -0.68
SMARCE1-202ENST00000348513 TTC24A2A3L6 582 aaPredicted RBP10.83□□□□□ -0.68
SMARCE1-202ENST00000348513 KCNU1A8MYU2 1149 aa10.83□□□□□ -0.68
SMARCE1-202ENST00000348513 C8AP07357 584 aa10.83□□□□□ -0.68
SMARCE1-202ENST00000348513 NMBRP28336 390 aa10.83□□□□□ -0.68
SMARCE1-202ENST00000348513 EIF2DP41214 584 aaKnown RBP10.83□□□□□ -0.68
SMARCE1-202ENST00000348513 LIMK2P53671 638 aa10.83□□□□□ -0.68
SMARCE1-202ENST00000348513 TAS2R41P59536 307 aa10.83□□□□□ -0.68
SMARCE1-202ENST00000348513 NKX6-1P78426 367 aaPredicted RBP10.83□□□□□ -0.68
SMARCE1-202ENST00000348513 TIGD6Q17RP2 521 aa10.83□□□□□ -0.68
SMARCE1-202ENST00000348513 C9orf64Q5T6V5 341 aa10.83□□□□□ -0.68
SMARCE1-202ENST00000348513 MFSD2AQ8NA29 543 aa10.83□□□□□ -0.68
SMARCE1-202ENST00000348513 BBS1Q8NFJ9 593 aa10.83□□□□□ -0.68
SMARCE1-202ENST00000348513 SNIP1Q8TAD8 396 aaKnown RBP10.83□□□□□ -0.68
SMARCE1-202ENST00000348513 HBEGFQ99075 208 aa10.83□□□□□ -0.68
SMARCE1-202ENST00000348513 ARHGEF4Q9NR80 690 aa10.83□□□□□ -0.68
SMARCE1-202ENST00000348513 TBC1D30Q9Y2I9 924 aa10.83□□□□□ -0.68
SMARCE1-202ENST00000348513 IRAK3Q9Y616 596 aa10.83□□□□□ -0.68
SMARCE1-202ENST00000348513 PGRMC2O15173 223 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 ADAM12O43184 909 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 REM1O75628 298 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 NDST3O95803 873 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 TBX18O95935 607 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 S100A8P05109 93 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 PTPN2P17706 415 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 SLC7A1P30825 629 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 FAM220AQ7Z4H9 259 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 SPATA5L1Q9BVQ7 753 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 BTBD2Q9BX70 525 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 CLUHO75153 1309 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 TMEM127O75204 238 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 TP53P04637 393 aaPredicted RBP10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 SLC6A2P23975 617 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 IGFBP5P24593 272 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 OPRL1P41146 370 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 HSPA7P48741 367 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 SLC7A2P52569 658 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 CACNG1Q06432 222 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 AGAP6Q5VW22 663 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 LRP10Q7Z4F1 713 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 SIDT2Q8NBJ9 832 aaKnown RBP10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 ZNF563Q8TA94 476 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 HERVK_113Q902F9 699 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 AGAP4Q96P64 663 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 PKP2Q99959 881 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 FEM1AQ9BSK4 669 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 SNTG1Q9NSN8 517 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 UGT2A1Q9Y4X1 527 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 A0A0J9YYE9 177 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 MYOCOSA0A1B0GUC4 107 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 IRGMA1A4Y4 181 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 DLGAP1O14490 977 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 C22orf31O95567 290 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 GOT2P00505 430 aaKnown RBP10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 PBX1P40424 430 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 MNDAP41218 407 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 GRM3Q14832 879 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 ALG11Q2TAA5 492 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 CPTPQ5TA50 214 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 FAM180BQ6P0A1 224 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 PEG10Q86TG7 708 aaKnown RBP10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 GALNT13Q8IUC8 556 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 UBR7Q8N806 425 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 ATP6V1C2Q8NEY4 427 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 OR7G3Q8NG95 312 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 RGCCQ9H4X1 137 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 MCCC2Q9HCC0 563 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 ABCB8Q9NUT2 735 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 CDH7Q9ULB5 785 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 CORO2BQ9UQ03 480 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 NEURL4Q96JN8 1562 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 AFDNP55196 1824 aaKnown RBP10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 YJEFN3A6XGL0 299 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 MCIDASD6RGH6 385 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 SYN3O14994 580 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 MITFO75030 526 aaPredicted RBP10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 SCGNO76038 276 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 FUCA1P04066 466 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 BPGMP07738 259 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 CAP1Q01518 475 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 LSM12Q3MHD2 195 aaKnown RBP10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 CHST15Q7LFX5 561 aaPredicted RBP10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 SNX18Q96RF0 628 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 DPEP2Q9H4A9 486 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 ELAC1Q9H777 363 aaKnown RBP10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 RPF2Q9H7B2 306 aaKnown RBP10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 ADGRE2Q9UHX3 823 aa10.82□□□□□ -0.68
SMARCE1-202ENST00000348513 SLIT3O75094 1523 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms