RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 APOPT1Q96IL0 206 aa16.03■□□□□ 0.16
SFN-201ENST00000339276 ZNF578Q96N58 590 aaPredicted RBP16.03■□□□□ 0.16
SFN-201ENST00000339276 TEFMQ96QE5 360 aaKnown RBP16.03■□□□□ 0.16
SFN-201ENST00000339276 ZFYVE21Q9BQ24 234 aa16.03■□□□□ 0.16
SFN-201ENST00000339276 B3GNT4Q9C0J1 378 aa16.03■□□□□ 0.16
SFN-201ENST00000339276 SPNS1Q9H2V7 528 aa16.03■□□□□ 0.16
SFN-201ENST00000339276 TMEM184CQ9NVA4 438 aa16.03■□□□□ 0.16
SFN-201ENST00000339276 KCNE2Q9Y6J6 123 aa16.03■□□□□ 0.16
SFN-201ENST00000339276 FREM2Q5SZK8 3169 aa16.03■□□□□ 0.16
SFN-201ENST00000339276 SDK2Q58EX2 2172 aa16.03■□□□□ 0.16
SFN-201ENST00000339276 A8MT66 165 aa16.02■□□□□ 0.16
SFN-201ENST00000339276 H3BMH7 237 aa16.02■□□□□ 0.16
SFN-201ENST00000339276 CAPNS1P04632 268 aa16.02■□□□□ 0.16
SFN-201ENST00000339276 EZRP15311 586 aaKnown RBP16.02■□□□□ 0.16
SFN-201ENST00000339276 CREB1P16220 341 aa16.02■□□□□ 0.16
SFN-201ENST00000339276 EPORP19235 508 aa16.02■□□□□ 0.16
SFN-201ENST00000339276 HRH2P25021 359 aa16.02■□□□□ 0.16
SFN-201ENST00000339276 CCT5P48643 541 aa16.02■□□□□ 0.16
SFN-201ENST00000339276 ITGA1P56199 1179 aa16.02■□□□□ 0.16
SFN-201ENST00000339276 COL9A2Q14055 689 aaPredicted RBP16.02■□□□□ 0.16
SFN-201ENST00000339276 BANPQ8N9N5 519 aa16.02■□□□□ 0.16
SFN-201ENST00000339276 OR8K5Q8NH50 307 aa16.02■□□□□ 0.16
SFN-201ENST00000339276 SELENOSQ9BQE4 189 aa16.02■□□□□ 0.16
SFN-201ENST00000339276 ZPBPQ9BS86 351 aa16.02■□□□□ 0.16
SFN-201ENST00000339276 SPRTNQ9H040 489 aaPredicted RBP16.02■□□□□ 0.16
SFN-201ENST00000339276 MKS1Q9NXB0 559 aa16.02■□□□□ 0.16
SFN-201ENST00000339276 OPTCQ9UBM4 332 aa16.02■□□□□ 0.16
SFN-201ENST00000339276 DKK4Q9UBT3 224 aa16.02■□□□□ 0.16
SFN-201ENST00000339276 TMCO1Q9UM00 188 aa16.02■□□□□ 0.16
SFN-201ENST00000339276 LOC105369274A0A096LPK9 316 aa16.01■□□□□ 0.15
SFN-201ENST00000339276 LOC102723532A0A0G2JNH3 316 aa16.01■□□□□ 0.15
SFN-201ENST00000339276 FEZF1A0PJY2 475 aa16.01■□□□□ 0.15
SFN-201ENST00000339276 STX16-NPEPL1H3BU86 382 aa16.01■□□□□ 0.15
SFN-201ENST00000339276 K7EPI3 171 aa16.01■□□□□ 0.15
SFN-201ENST00000339276 STX16O14662 325 aa16.01■□□□□ 0.15
SFN-201ENST00000339276 TLX3O43711 291 aaPredicted RBP16.01■□□□□ 0.15
SFN-201ENST00000339276 SPAG7O75391 227 aa16.01■□□□□ 0.15
SFN-201ENST00000339276 SCRG1O75711 98 aa16.01■□□□□ 0.15
SFN-201ENST00000339276 OR2B3O76000 313 aa16.01■□□□□ 0.15
SFN-201ENST00000339276 STK17BO94768 372 aa16.01■□□□□ 0.15
SFN-201ENST00000339276 PROCP04070 461 aa16.01■□□□□ 0.15
SFN-201ENST00000339276 GNAZP19086 355 aa16.01■□□□□ 0.15
SFN-201ENST00000339276 VARSP26640 1264 aaKnown RBP16.01■□□□□ 0.15
SFN-201ENST00000339276 EEF1DP29692 281 aaKnown RBP16.01■□□□□ 0.15
SFN-201ENST00000339276 CCR8P51685 355 aa16.01■□□□□ 0.15
SFN-201ENST00000339276 VSX2P58304 361 aaPredicted RBP16.01■□□□□ 0.15
SFN-201ENST00000339276 PCBP2Q15366 365 aaKnown RBP eCLIP16.01■□□□□ 0.156e-18■■■■■ 73.7
SFN-201ENST00000339276 NXPE4Q6UWF7 544 aa16.01■□□□□ 0.15
SFN-201ENST00000339276 SLCO4C1Q6ZQN7 724 aa16.01■□□□□ 0.15
SFN-201ENST00000339276 CROCCP2Q86T23 111 aa16.01■□□□□ 0.15
SFN-201ENST00000339276 BPHLQ86WA6 291 aaPredicted RBP16.01■□□□□ 0.15
SFN-201ENST00000339276 ZFAND4Q86XD8 727 aa16.01■□□□□ 0.15
SFN-201ENST00000339276 TMEM126BQ8IUX1 230 aa16.01■□□□□ 0.15
SFN-201ENST00000339276 OR4N4Q8N0Y3 316 aa16.01■□□□□ 0.15
SFN-201ENST00000339276 TEX9Q8N6V9 391 aa16.01■□□□□ 0.15
SFN-201ENST00000339276 OR4K1Q8NGD4 311 aa16.01■□□□□ 0.15
SFN-201ENST00000339276 OR2A5Q96R48 311 aa16.01■□□□□ 0.15
SFN-201ENST00000339276 SMC6Q96SB8 1091 aa16.01■□□□□ 0.15
SFN-201ENST00000339276 ULBP3Q9BZM4 244 aa16.01■□□□□ 0.15
SFN-201ENST00000339276 PELI2Q9HAT8 420 aa16.01■□□□□ 0.15
SFN-201ENST00000339276 STARD5Q9NSY2 213 aa16.01■□□□□ 0.15
SFN-201ENST00000339276 IRAK4Q9NWZ3 460 aa16.01■□□□□ 0.15
SFN-201ENST00000339276 GPRC5BQ9NZH0 403 aa16.01■□□□□ 0.15
SFN-201ENST00000339276 SERTAD3Q9UJW9 196 aa16.01■□□□□ 0.15
SFN-201ENST00000339276 GRID1Q9ULK0 1009 aa16.01■□□□□ 0.15
SFN-201ENST00000339276 MDC1Q14676 2089 aaKnown RBP16.01■□□□□ 0.15
SFN-201ENST00000339276 SPTBP11277 2137 aa16.01■□□□□ 0.15
SFN-201ENST00000339276 H0YGG7 62 aa16■□□□□ 0.15
SFN-201ENST00000339276 E2F3O00716 465 aa16■□□□□ 0.15
SFN-201ENST00000339276 DLX3O60479 287 aa16■□□□□ 0.15
SFN-201ENST00000339276 PLIN3O60664 434 aa16■□□□□ 0.15
SFN-201ENST00000339276 PRAMEF4O60810 478 aa16■□□□□ 0.15
SFN-201ENST00000339276 KIAA0754O94854 1291 aa16■□□□□ 0.15
SFN-201ENST00000339276 NTRK1P04629 796 aa16■□□□□ 0.15
SFN-201ENST00000339276 TAC1P20366 129 aa16■□□□□ 0.15
SFN-201ENST00000339276 BCL6P41182 706 aa16■□□□□ 0.15
SFN-201ENST00000339276 ARF3P61204 181 aaPredicted RBP16■□□□□ 0.15
SFN-201ENST00000339276 REEP5Q00765 189 aa16■□□□□ 0.15
SFN-201ENST00000339276 RELAQ04206 551 aa16■□□□□ 0.15
SFN-201ENST00000339276 CCDC153Q494R4 210 aa16■□□□□ 0.15
SFN-201ENST00000339276 TNFAIP8L3Q5GJ75 292 aa16■□□□□ 0.15
SFN-201ENST00000339276 PRAMEF9Q5VWM5 478 aa16■□□□□ 0.15
SFN-201ENST00000339276 GPR135Q8IZ08 494 aa16■□□□□ 0.15
SFN-201ENST00000339276 ZNF655Q8N720 491 aaPredicted RBP16■□□□□ 0.15
SFN-201ENST00000339276 ZNF740Q8NDX6 193 aa16■□□□□ 0.15
SFN-201ENST00000339276 PGM2Q96G03 612 aa16■□□□□ 0.15
SFN-201ENST00000339276 ZNF285Q96NJ3 590 aa16■□□□□ 0.15
SFN-201ENST00000339276 RUFY1Q96T51 708 aa16■□□□□ 0.15
SFN-201ENST00000339276 SENP1Q9P0U3 644 aa16■□□□□ 0.15
SFN-201ENST00000339276 ACSL6Q9UKU0 697 aa16■□□□□ 0.15
SFN-201ENST00000339276 ANGPTL3Q9Y5C1 460 aa16■□□□□ 0.15
SFN-201ENST00000339276 TNPO3Q9Y5L0 923 aaKnown RBP16■□□□□ 0.15
SFN-201ENST00000339276 CHD8Q9HCK8 2581 aa15.99■□□□□ 0.15
SFN-201ENST00000339276 UQCRHLA0A096LP55 91 aa15.99■□□□□ 0.15
SFN-201ENST00000339276 TEX51A0A1B0GUA7 166 aa15.99■□□□□ 0.15
SFN-201ENST00000339276 CLGNO14967 610 aa15.99■□□□□ 0.15
SFN-201ENST00000339276 ZSCAN9O15535 394 aaPredicted RBP15.99■□□□□ 0.15
SFN-201ENST00000339276 ZNF749O43361 778 aa15.99■□□□□ 0.15
SFN-201ENST00000339276 LCMT2O60294 686 aaKnown RBP15.99■□□□□ 0.15
SFN-201ENST00000339276 SRPX2O60687 465 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms