RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 RUVBL1Q9Y265 456 aaKnown RBP17.14■□□□□ 0.33
LRCH3-201ENST00000334859 SNX5Q9Y5X3 404 aa17.14■□□□□ 0.33
LRCH3-201ENST00000334859 SERTM1A2A2V5 107 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 KLHL33A6NCF5 533 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 PTGES3LE9PB15 166 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 SLC1A7O00341 560 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 ATG13O75143 517 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 PSIP1O75475 530 aaKnown RBP17.13■□□□□ 0.33
LRCH3-201ENST00000334859 DIRAS1O95057 198 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 SLC16A8O95907 504 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 CTSLP07711 333 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 HTR1AP08908 422 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 LAMP1P11279 417 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 TMBIM6P55061 237 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 WNT3P56703 355 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 GABARAPL2P60520 117 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 ISL1P61371 349 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 IL5RAQ01344 420 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 GRSF1Q12849 480 aaKnown RBP eCLIP17.13■□□□□ 0.33
LRCH3-201ENST00000334859 OR2T5Q6IEZ7 315 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 KLHL35Q6PF15 583 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 VTCN1Q7Z7D3 282 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 ZBTB46Q86UZ6 589 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 ZZZ3Q8IYH5 903 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 CHPFQ8IZ52 775 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 RASGEF1AQ8N9B8 481 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 OR2T29Q8NH02 315 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 HSPBAP1Q96EW2 488 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 BARD1Q99728 777 aaKnown RBP17.13■□□□□ 0.33
LRCH3-201ENST00000334859 CCDC90BQ9GZT6 254 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 SPATA6Q9NWH7 488 aaPredicted RBP17.13■□□□□ 0.33
LRCH3-201ENST00000334859 IL36AQ9UHA7 158 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 BAG5Q9UL15 447 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 HIDE1A8MVS5 230 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 QSOX1O00391 747 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 KCNK5O95279 499 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 ELFN1P0C7U0 828 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 ZNF182P17025 639 aaPredicted RBP17.13■□□□□ 0.33
LRCH3-201ENST00000334859 ARHGDIAP52565 204 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 NFATC3Q12968 1075 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 BNIP3Q12983 259 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 ACOX1Q15067 660 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 ARHGAP15Q53QZ3 475 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 PLPP4Q5VZY2 271 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 CEP68Q76N32 757 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 C1orf52Q8N6N3 182 aaKnown RBP17.13■□□□□ 0.33
LRCH3-201ENST00000334859 ZNF557Q8N988 423 aaPredicted RBP17.13■□□□□ 0.33
LRCH3-201ENST00000334859 GPR156Q8NFN8 814 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 BTN2A2Q8WVV5 523 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 OR4K3Q96R72 315 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 IL1RAPQ9NPH3 570 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 RPS6KA6Q9UK32 745 aa17.13■□□□□ 0.33
LRCH3-201ENST00000334859 ZBBXA8MT70 800 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 PFDN1O60925 122 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 FKBP9O95302 570 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 FABP3P05413 133 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 PLA2G16P53816 162 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 RAPSNQ13702 412 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 TUBA3CQ13748 450 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 LDLRAP1Q5SW96 308 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 GRHL2Q6ISB3 625 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 LAIR2Q6ISS4 152 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 ERICH5Q6P6B1 374 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 HORMAD1Q86X24 394 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 ZC3H7AQ8IWR0 971 aaKnown RBP17.12■□□□□ 0.33
LRCH3-201ENST00000334859 OR8J2Q8NGG1 315 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 CNIH3Q8TBE1 160 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 RAB2BQ8WUD1 216 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 GLMNQ92990 594 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 GLYATL1Q969I3 302 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 ITM2BQ9Y287 266 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 SCAMP2O15127 329 aaKnown RBP17.12■□□□□ 0.33
LRCH3-201ENST00000334859 SCN2BO60939 215 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 ETHE1O95571 254 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 ANXA4P09525 319 aaPredicted RBP17.12■□□□□ 0.33
LRCH3-201ENST00000334859 KDELR2P33947 212 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 HNF4AP41235 474 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 HNRNPFP52597 415 aaKnown RBP17.12■□□□□ 0.33
LRCH3-201ENST00000334859 TOP3AQ13472 1001 aaPredicted RBP17.12■□□□□ 0.33
LRCH3-201ENST00000334859 TSTA3Q13630 321 aaPredicted RBP17.12■□□□□ 0.33
LRCH3-201ENST00000334859 SIM2Q14190 667 aaPredicted RBP17.12■□□□□ 0.33
LRCH3-201ENST00000334859 XKR5Q6UX68 686 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 PTOV1Q86YD1 416 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 RASGRP3Q8IV61 690 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 CROCCP3Q8IVE0 287 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 PIK3C3Q8NEB9 887 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 MIPOL1Q8TD10 442 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 AP2M1Q96CW1 435 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 HSH2DQ96JZ2 352 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 MRGPRX3Q96LB0 322 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 DUSP26Q9BV47 211 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 TM9SF3Q9HD45 589 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 RAD18Q9NS91 495 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 ERVK-11Q9UQG0 969 aa17.12■□□□□ 0.33
LRCH3-201ENST00000334859 H0YIV9 168 aa17.11■□□□□ 0.33
LRCH3-201ENST00000334859 YY2O15391 372 aa17.11■□□□□ 0.33
LRCH3-201ENST00000334859 SLC16A6O15403 523 aa17.11■□□□□ 0.33
LRCH3-201ENST00000334859 EFCAB14O75071 495 aa17.11■□□□□ 0.33
LRCH3-201ENST00000334859 RHOP08100 348 aa17.11■□□□□ 0.33
LRCH3-201ENST00000334859 ITGAMP11215 1152 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms