RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 TMCC2O75069 709 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 COX7A2P14406 83 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 RPL10P27635 214 aaKnown RBP11.46□□□□□ -0.57
HDAC6-201ENST00000334136 ARSDP51689 593 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 COPZ1P61923 177 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 ZXDBP98169 803 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 ACSM2AQ08AH3 577 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 ACAP2Q15057 778 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 OGFRL1Q5TC84 451 aaPredicted RBP11.46□□□□□ -0.57
HDAC6-201ENST00000334136 ACSM2BQ68CK6 577 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 TMEM135Q86UB9 458 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 UBE2J2Q8N2K1 259 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 SIDT2Q8NBJ9 832 aaKnown RBP11.46□□□□□ -0.57
HDAC6-201ENST00000334136 LRRC58Q96CX6 371 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 SMIM14Q96QK8 99 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 CHCHD6Q9BRQ6 235 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 HDHD2Q9H0R4 259 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 DKK3Q9UBP4 350 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 WNT16Q9UBV4 365 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 COLEC10Q9Y6Z7 277 aa11.46□□□□□ -0.57
HDAC6-201ENST00000334136 RALGAPA2Q2PPJ7 1873 aa11.46□□□□□ -0.58
HDAC6-201ENST00000334136 SNNO75324 88 aaPredicted RBP11.46□□□□□ -0.58
HDAC6-201ENST00000334136 ALPPL2P10696 532 aa11.46□□□□□ -0.58
HDAC6-201ENST00000334136 KRT20P35900 424 aa11.46□□□□□ -0.58
HDAC6-201ENST00000334136 CRATP43155 626 aa11.46□□□□□ -0.58
HDAC6-201ENST00000334136 GSK3BP49841 420 aa11.46□□□□□ -0.58
HDAC6-201ENST00000334136 IRF8Q02556 426 aa11.46□□□□□ -0.58
HDAC6-201ENST00000334136 LCP2Q13094 533 aa11.46□□□□□ -0.58
HDAC6-201ENST00000334136 TMEM31Q5JXX7 168 aa11.46□□□□□ -0.58
HDAC6-201ENST00000334136 LIPIQ6XZB0 460 aa11.46□□□□□ -0.58
HDAC6-201ENST00000334136 PIM3Q86V86 326 aa11.46□□□□□ -0.58
HDAC6-201ENST00000334136 CILP2Q8IUL8 1156 aa11.46□□□□□ -0.58
HDAC6-201ENST00000334136 ZC3H7AQ8IWR0 971 aaKnown RBP11.46□□□□□ -0.58
HDAC6-201ENST00000334136 NRSN1Q8IZ57 195 aa11.46□□□□□ -0.58
HDAC6-201ENST00000334136 FAM9CQ8IZT9 166 aa11.46□□□□□ -0.58
HDAC6-201ENST00000334136 PPP3R2Q96LZ3 170 aa11.46□□□□□ -0.58
HDAC6-201ENST00000334136 ACAT2Q9BWD1 397 aa11.46□□□□□ -0.58
HDAC6-201ENST00000334136 PRKAB1Q9Y478 270 aa11.46□□□□□ -0.58
HDAC6-201ENST00000334136 FMO3P31513 532 aa11.46□□□□□ -0.58
HDAC6-201ENST00000334136 LAPTM5Q13571 262 aa11.46□□□□□ -0.58
HDAC6-201ENST00000334136 GPR180Q86V85 440 aa11.46□□□□□ -0.58
HDAC6-201ENST00000334136 SYNPOQ8N3V7 929 aa11.46□□□□□ -0.58
HDAC6-201ENST00000334136 PNPLA1Q8N8W4 532 aa11.46□□□□□ -0.58
HDAC6-201ENST00000334136 TRPV3Q8NET8 790 aa11.46□□□□□ -0.58
HDAC6-201ENST00000334136 ARRDC3Q96B67 414 aa11.46□□□□□ -0.58
HDAC6-201ENST00000334136 C12orf66Q96MD2 445 aa11.46□□□□□ -0.58
HDAC6-201ENST00000334136 WDR92Q96MX6 357 aa11.46□□□□□ -0.58
HDAC6-201ENST00000334136 STMN3Q9NZ72 180 aa11.46□□□□□ -0.58
HDAC6-201ENST00000334136 MOCS1Q9NZB8 636 aa11.46□□□□□ -0.58
HDAC6-201ENST00000334136 GSAPA4D1B5 854 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 K7EPI3 171 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 KMOO15229 486 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 EPB42P16452 691 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 HNRNPA2B1P22626 353 aaKnown RBP11.45□□□□□ -0.58
HDAC6-201ENST00000334136 RAB14P61106 215 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 CREB5Q02930 508 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 PIGFQ07326 219 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 TRAP1Q12931 704 aaKnown RBP11.45□□□□□ -0.58
HDAC6-201ENST00000334136 SLC14A2Q15849 920 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 CYP2A13Q16696 494 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 ATP13A5Q4VNC0 1218 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 ERMP1Q7Z2K6 904 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 NACC2Q96BF6 587 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 DMRTB1Q96MA1 342 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 LRRC3BQ96PB8 259 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 CDK15Q96Q40 435 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 CCM2Q9BSQ5 444 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 S1PR5Q9H228 398 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 ARNT2Q9HBZ2 717 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 LTB4R2Q9NPC1 389 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 PDP1Q9P0J1 537 aaPredicted RBP11.45□□□□□ -0.58
HDAC6-201ENST00000334136 AKAP7Q9P0M2 348 aaPredicted RBP11.45□□□□□ -0.58
HDAC6-201ENST00000334136 EIF2B4Q9UI10 523 aaKnown RBP11.45□□□□□ -0.58
HDAC6-201ENST00000334136 SPATA2Q9UM82 520 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 KCNK6Q9Y257 313 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 ELOVL7A1L3X0 281 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 AQP12BA6NM10 295 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.45□□□□□ -0.58
HDAC6-201ENST00000334136 RGS10O43665 173 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 SNAP29O95721 258 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 EFNA1P20827 205 aaPredicted RBP11.45□□□□□ -0.58
HDAC6-201ENST00000334136 PRKACGP22612 351 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 ALDH9A1P49189 494 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 HERC3Q15034 1050 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 TGFBIQ15582 683 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 TAB1Q15750 504 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 LPAL2Q16609 132 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 PAQR3Q6TCH7 311 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 DPPA4Q7L190 304 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 LUZP2Q86TE4 346 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 AQP12AQ8IXF9 295 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 CAMKK1Q8N5S9 505 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 TRIM63Q969Q1 353 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 KCNA7Q96RP8 456 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 CD320Q9NPF0 282 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 RPRD1BQ9NQG5 326 aaKnown RBP11.45□□□□□ -0.58
HDAC6-201ENST00000334136 PRDM6Q9NQX0 595 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 PSME2Q9UL46 239 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 PADI4Q9UM07 663 aa11.45□□□□□ -0.58
HDAC6-201ENST00000334136 hCG_2039718K7EN88 272 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms