RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 KRT38O76015 456 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 ITGB2P05107 769 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 ABHD2P08910 425 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 LTA4HP09960 611 aaKnown RBP13.4□□□□□ -0.26
LIMS1-201ENST00000332345 SLC35E2BP0CK96 405 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 CNTFP26441 200 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 TYK2P29597 1187 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 CCR8P51685 355 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 ARF3P61204 181 aaPredicted RBP13.4□□□□□ -0.26
LIMS1-201ENST00000332345 RPS15AP62244 130 aaKnown RBP13.4□□□□□ -0.26
LIMS1-201ENST00000332345 TGFBIQ15582 683 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 FAM83EQ2M2I3 478 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 PTCHD3Q3KNS1 767 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 TAF1BQ53T94 588 aaPredicted RBP13.4□□□□□ -0.26
LIMS1-201ENST00000332345 C1orf189Q5VU69 101 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 C16orf46Q6P387 395 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 TTLL10Q6ZVT0 673 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 CMC1Q7Z7K0 106 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 OR4N4Q8N0Y3 316 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 CNPY4Q8N129 248 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 TCAIMQ8N3R3 496 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 UHMK1Q8TAS1 419 aaKnown RBP13.4□□□□□ -0.26
LIMS1-201ENST00000332345 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.4□□□□□ -0.263e-6■■■■■ 50.8
LIMS1-201ENST00000332345 THAP11Q96EK4 314 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 WBP1Q96G27 269 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 GBP5Q96PP8 586 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 DHRS4Q9BTZ2 278 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 UNKQ9C0B0 810 aaKnown RBP13.4□□□□□ -0.26
LIMS1-201ENST00000332345 ACTL8Q9H568 366 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 CNOT10Q9H9A5 744 aaKnown RBP13.4□□□□□ -0.26
LIMS1-201ENST00000332345 STARD5Q9NSY2 213 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 CUTCQ9NTM9 273 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 CUEDC1Q9NWM3 386 aaPredicted RBP13.4□□□□□ -0.26
LIMS1-201ENST00000332345 IFT80Q9P2H3 777 aaPredicted RBP13.4□□□□□ -0.26
LIMS1-201ENST00000332345 DHCR7Q9UBM7 475 aaKnown RBP13.4□□□□□ -0.26
LIMS1-201ENST00000332345 NDOR1Q9UHB4 597 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 ZNF180Q9UJW8 692 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 RNF112Q9ULX5 631 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 MRPS18BQ9Y676 258 aaKnown RBP13.4□□□□□ -0.26
LIMS1-201ENST00000332345 KCNE2Q9Y6J6 123 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 ITPR1Q14643 2758 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 FAM208BQ5VWN6 2430 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 KCNE1BA0A087WTH5 132 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 EXOC1LA0A1B0GW35 172 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 A0A1B0GX78 115 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 CCDC189A1A4V9 331 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 HMX2A2RU54 273 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 HAT1O14929 419 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 DSCR3O14972 297 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 NRP2O60462 931 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 S100BP04271 92 aaPredicted RBP13.39□□□□□ -0.27
LIMS1-201ENST00000332345 C2P06681 752 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 FAM153BP0C7A2 387 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 CDH1P12830 882 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 SERPINB8P50452 374 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 EMP3P54852 163 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 CYP4F2P78329 520 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 BMPR2Q13873 1038 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 ERV3-1Q14264 604 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 ZXDCQ2QGD7 858 aaPredicted RBP13.39□□□□□ -0.27
LIMS1-201ENST00000332345 FAM153CQ494X1 144 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 NKAIN1Q4KMZ8 207 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 UBAP2Q5T6F2 1119 aaKnown RBP13.39□□□□□ -0.27
LIMS1-201ENST00000332345 MLIPQ5VWP3 458 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 ZNF385CQ66K41 422 aaPredicted RBP13.39□□□□□ -0.27
LIMS1-201ENST00000332345 SULT1C3Q6IMI6 304 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 LCN10Q6JVE6 187 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 SYVN1Q86TM6 617 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 ISCA2Q86U28 154 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 THOC6Q86W42 341 aaKnown RBP13.39□□□□□ -0.27
LIMS1-201ENST00000332345 TBC1D19Q8N5T2 526 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 CSNK1A1LQ8N752 337 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 LSM14AQ8ND56 463 aaKnown RBP13.39□□□□□ -0.27
LIMS1-201ENST00000332345 ABHD11Q8NFV4 315 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 RHBDF1Q96CC6 855 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 OR2A5Q96R48 311 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 PAFAH2Q99487 392 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 CCDC77Q9BR77 488 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 CAPS2Q9BXY5 557 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 SNX15Q9NRS6 342 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 CD274Q9NZQ7 290 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 SLC22A14Q9Y267 594 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 PADI2Q9Y2J8 665 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 DYRK1BQ9Y463 629 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 CCDC88CQ9P219 2028 aa13.39□□□□□ -0.27
LIMS1-201ENST00000332345 A0A096LPK6 155 aa13.38□□□□□ -0.27
LIMS1-201ENST00000332345 NCF1BA6NI72 391 aaPredicted RBP13.38□□□□□ -0.27
LIMS1-201ENST00000332345 NCF1CA8MVU1 366 aaPredicted RBP13.38□□□□□ -0.27
LIMS1-201ENST00000332345 RIPK2O43353 540 aa13.38□□□□□ -0.27
LIMS1-201ENST00000332345 PRKAR1AP10644 381 aa13.38□□□□□ -0.27
LIMS1-201ENST00000332345 NCF1P14598 390 aaPredicted RBP13.38□□□□□ -0.27
LIMS1-201ENST00000332345 TFEBP19484 476 aa13.38□□□□□ -0.27
LIMS1-201ENST00000332345 TNFRSF8P28908 595 aa13.38□□□□□ -0.27
LIMS1-201ENST00000332345 GGT5P36269 586 aa13.38□□□□□ -0.27
LIMS1-201ENST00000332345 GCGRP47871 477 aa13.38□□□□□ -0.27
LIMS1-201ENST00000332345 CSNK1G2P78368 415 aa13.38□□□□□ -0.27
LIMS1-201ENST00000332345 CDC20Q12834 499 aa13.38□□□□□ -0.27
LIMS1-201ENST00000332345 SLC29A2Q14542 456 aa13.38□□□□□ -0.27
LIMS1-201ENST00000332345 OR4D1Q15615 310 aa13.38□□□□□ -0.27
LIMS1-201ENST00000332345 MUM1Q2TAK8 710 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms