RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 KCNK6Q9Y257 313 aa16.35■□□□□ 0.21
DDX41-201ENST00000330503 MAN2B2Q9Y2E5 1009 aa16.35■□□□□ 0.21
DDX41-201ENST00000330503 MYO10Q9HD67 2058 aa16.35■□□□□ 0.21
DDX41-201ENST00000330503 PIPSLA2A3N6 862 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 POM121BA6NF01 834 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 FOXE1O00358 373 aaPredicted RBP16.34■□□□□ 0.21
DDX41-201ENST00000330503 MBTPS2O43462 519 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 AKAP10O43572 662 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 SLC35G4P0C7Q5 338 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 CD72P21854 359 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 SOX11P35716 441 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 ACSM2AQ08AH3 577 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 ARHGAP19Q14CB8 494 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 UGT8Q16880 541 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 GTDC1Q4AE62 458 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 THEMIS2Q5TEJ8 643 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 IRAK1BP1Q5VVH5 260 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 ACSM2BQ68CK6 577 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 SYT12Q8IV01 421 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 REPS1Q96D71 796 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 INPP5KQ9BT40 448 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 VCX3BQ9H321 246 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 TRIT1Q9H3H1 467 aaKnown RBP16.34■□□□□ 0.21
DDX41-201ENST00000330503 CCM2LQ9NUG4 571 aaPredicted RBP16.34■□□□□ 0.21
DDX41-201ENST00000330503 LRCH1Q9Y2L9 728 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 SNX13Q9Y5W8 968 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 TCRBV5S2A0A599 114 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 RPN2P04844 631 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 CDH1P12830 882 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 HOXB9P17482 250 aaPredicted RBP16.34■□□□□ 0.21
DDX41-201ENST00000330503 HRH2P25021 359 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 PTPN6P29350 595 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 ACSL1P33121 698 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 AQP4P55087 323 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 CLDN2P57739 230 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 TFF2Q03403 129 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 CCINQ13939 588 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 PAGE2BQ5JRK9 111 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 TMEM31Q5JXX7 168 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 KIAA1324Q6UXG2 1013 aaKnown RBP16.34■□□□□ 0.21
DDX41-201ENST00000330503 FAM129CQ86XR2 697 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 TBC1D21Q8IYX1 336 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 FERD3LQ96RJ6 166 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 TRIM15Q9C019 465 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 KCNH6Q9H252 994 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 ARMC1Q9NVT9 282 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 PCDHB3Q9Y5E6 796 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 PCDHB14Q9Y5E9 798 aa16.34■□□□□ 0.21
DDX41-201ENST00000330503 A0A096LPI6 279 aa16.33■□□□□ 0.21
DDX41-201ENST00000330503 A0A1W2PPV9 198 aa16.33■□□□□ 0.21
DDX41-201ENST00000330503 ACADMP11310 421 aa16.33■□□□□ 0.21
DDX41-201ENST00000330503 PRPS1L1P21108 318 aa16.33■□□□□ 0.21
DDX41-201ENST00000330503 HSD17B2P37059 387 aa16.33■□□□□ 0.21
DDX41-201ENST00000330503 WNT3P56703 355 aa16.33■□□□□ 0.21
DDX41-201ENST00000330503 MTAPQ13126 283 aa16.33■□□□□ 0.21
DDX41-201ENST00000330503 LAPTM5Q13571 262 aa16.33■□□□□ 0.21
DDX41-201ENST00000330503 CLCA4Q14CN2 919 aa16.33■□□□□ 0.21
DDX41-201ENST00000330503 HIST2H2ACQ16777 129 aaPredicted RBP16.33■□□□□ 0.21
DDX41-201ENST00000330503 GRAMD1BQ3KR37 738 aa16.33■□□□□ 0.21
DDX41-201ENST00000330503 EOGTQ5NDL2 527 aa16.33■□□□□ 0.21
DDX41-201ENST00000330503 LRIF1Q5T3J3 769 aa16.33■□□□□ 0.21
DDX41-201ENST00000330503 HIST2H2AA3Q6FI13 130 aa16.33■□□□□ 0.21
DDX41-201ENST00000330503 OR4F3Q6IEY1 312 aa16.33■□□□□ 0.21
DDX41-201ENST00000330503 HMBOX1Q6NT76 420 aa16.33■□□□□ 0.21
DDX41-201ENST00000330503 ANKRD46Q86W74 232 aa16.33■□□□□ 0.21
DDX41-201ENST00000330503 GOLM1Q8NBJ4 401 aa16.33■□□□□ 0.21
DDX41-201ENST00000330503 OR7A2PQ8NGA2 310 aa16.33■□□□□ 0.21
DDX41-201ENST00000330503 C12orf66Q96MD2 445 aa16.33■□□□□ 0.21
DDX41-201ENST00000330503 HAUS8Q9BT25 410 aa16.33■□□□□ 0.21
DDX41-201ENST00000330503 ACAT2Q9BWD1 397 aa16.33■□□□□ 0.21
DDX41-201ENST00000330503 OSGEPL1Q9H4B0 414 aa16.33■□□□□ 0.21
DDX41-201ENST00000330503 FGF22Q9HCT0 170 aa16.33■□□□□ 0.21
DDX41-201ENST00000330503 DMRT3Q9NQL9 472 aa16.33■□□□□ 0.21
DDX41-201ENST00000330503 MOSPD1Q9UJG1 213 aa16.33■□□□□ 0.21
DDX41-201ENST00000330503 CA5BQ9Y2D0 317 aa16.33■□□□□ 0.21
DDX41-201ENST00000330503 GPSM3Q9Y4H4 160 aa16.33■□□□□ 0.21
DDX41-201ENST00000330503 CROCCQ5TZA2 2017 aa16.33■□□□□ 0.2
DDX41-201ENST00000330503 CACNB4O00305 520 aaPredicted RBP16.33■□□□□ 0.2
DDX41-201ENST00000330503 PRMT3O60678 531 aa16.33■□□□□ 0.2
DDX41-201ENST00000330503 SCN2BO60939 215 aa16.33■□□□□ 0.2
DDX41-201ENST00000330503 ERN1O75460 977 aaKnown RBP16.33■□□□□ 0.2
DDX41-201ENST00000330503 HOXC4P09017 264 aaPredicted RBP16.33■□□□□ 0.2
DDX41-201ENST00000330503 GLULP15104 373 aa16.33■□□□□ 0.2
DDX41-201ENST00000330503 TPMTP51580 245 aa16.33■□□□□ 0.2
DDX41-201ENST00000330503 C21orf58P58505 322 aa16.33■□□□□ 0.2
DDX41-201ENST00000330503 ANO7Q6IWH7 933 aa16.33■□□□□ 0.2
DDX41-201ENST00000330503 VN1R5Q7Z5H4 357 aa16.33■□□□□ 0.2
DDX41-201ENST00000330503 ADGRG5Q8IZF4 528 aa16.33■□□□□ 0.2
DDX41-201ENST00000330503 ADCY4Q8NFM4 1077 aa16.33■□□□□ 0.2
DDX41-201ENST00000330503 ITCHQ96J02 903 aa16.33■□□□□ 0.2
DDX41-201ENST00000330503 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.33■□□□□ 0.2
DDX41-201ENST00000330503 MMP17Q9ULZ9 603 aa16.33■□□□□ 0.2
DDX41-201ENST00000330503 DTNAQ9Y4J8 743 aa16.33■□□□□ 0.2
DDX41-201ENST00000330503 EYSQ5T1H1 3165 aa16.32■□□□□ 0.2
DDX41-201ENST00000330503 SCAMP1O15126 338 aa16.32■□□□□ 0.2
DDX41-201ENST00000330503 KCNJ13O60928 360 aa16.32■□□□□ 0.2
DDX41-201ENST00000330503 MYO1DO94832 1006 aa16.32■□□□□ 0.2
DDX41-201ENST00000330503 KLHL18O94889 574 aa16.32■□□□□ 0.2
DDX41-201ENST00000330503 GSNP06396 782 aa16.32■□□□□ 0.2
DDX41-201ENST00000330503 ANXA4P09525 319 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms