RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 BMPR1AP36894 532 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 DGKGP49619 791 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 RAE1P78406 368 aaKnown RBP14.08□□□□□ -0.16
TPM3-206ENST00000330188 SPIDRQ14159 915 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 VMACQ2NL98 169 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 ZNF658BQ4V348 819 aaPredicted RBP14.08□□□□□ -0.16
TPM3-206ENST00000330188 TCEAL5Q5H9L2 206 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 ZCCHC8Q6NZY4 707 aaKnown RBP14.08□□□□□ -0.16
TPM3-206ENST00000330188 C12orf40Q86WS4 652 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 ZDHHC21Q8IVQ6 265 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 CLECL1Q8IZS7 167 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 PGBD3Q8N328 593 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 VN1R2Q8NFZ6 395 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 CDC26Q8NHZ8 85 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 ZNF420Q8TAQ5 688 aaPredicted RBP14.08□□□□□ -0.16
TPM3-206ENST00000330188 METTL2AQ96IZ6 378 aaKnown RBP14.08□□□□□ -0.16
TPM3-206ENST00000330188 ATXN10Q9UBB4 475 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 TMEFF2Q9UIK5 374 aaPredicted RBP14.08□□□□□ -0.16
TPM3-206ENST00000330188 KIAA1549LQ6ZVL6 1849 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 NUP214P35658 2090 aaPredicted RBP14.08□□□□□ -0.16
TPM3-206ENST00000330188 PDE4DIPQ5VU43 2346 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 MAGEB17A8MXT2 336 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 SLC9A3R1O14745 358 aaPredicted RBP14.08□□□□□ -0.16
TPM3-206ENST00000330188 SPINT1O43278 529 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 HS6ST1O60243 411 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 XYLBO75191 536 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 EPN2O95208 641 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 KCNK5O95279 499 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 GPX2P18283 190 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 CRHBPP24387 322 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 GJA8P48165 433 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 METAP1P53582 386 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 NEDD8Q15843 81 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 LRRC23Q53EV4 343 aaPredicted RBP14.08□□□□□ -0.16
TPM3-206ENST00000330188 ZNF697Q5TEC3 545 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 GPR107Q5VW38 600 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 CPZQ66K79 652 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 ANKRD26P1Q6NSI1 321 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 ZNF621Q6ZSS3 439 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 NLRP8Q86W28 1048 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 PTOV1Q86YD1 416 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 HIPK1Q86Z02 1210 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 CHDHQ8NE62 594 aaPredicted RBP14.08□□□□□ -0.16
TPM3-206ENST00000330188 SP7Q8TDD2 431 aaPredicted RBP14.08□□□□□ -0.16
TPM3-206ENST00000330188 GAB3Q8WWW8 586 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 HDAC2Q92769 488 aaKnown RBP14.08□□□□□ -0.16
TPM3-206ENST00000330188 DTD2Q96FN9 168 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 COQ10AQ96MF6 247 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 FOPNLQ96NB1 174 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 TUBA1CQ9BQE3 449 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 WRAP53Q9BUR4 548 aaKnown RBP14.08□□□□□ -0.16
TPM3-206ENST00000330188 GULP1Q9UBP9 304 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 C3orf18Q9UK00 162 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 BTBD3Q9Y2F9 522 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 COQ6Q9Y2Z9 468 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 U3KQV3 271 aa14.08□□□□□ -0.16
TPM3-206ENST00000330188 H3BMQ9 156 aa14.07□□□□□ -0.16
TPM3-206ENST00000330188 PSMD11O00231 422 aa14.07□□□□□ -0.16
TPM3-206ENST00000330188 KPNA3O00505 521 aaPredicted RBP14.07□□□□□ -0.16
TPM3-206ENST00000330188 SCAMP2O15127 329 aaKnown RBP14.07□□□□□ -0.16
TPM3-206ENST00000330188 ATE1O95260 518 aa14.07□□□□□ -0.16
TPM3-206ENST00000330188 CPSF4O95639 269 aaKnown RBP14.07□□□□□ -0.16
TPM3-206ENST00000330188 ZNF682O95780 498 aa14.07□□□□□ -0.16
TPM3-206ENST00000330188 SOD1P00441 154 aa14.07□□□□□ -0.16
TPM3-206ENST00000330188 FGBP02675 491 aa14.07□□□□□ -0.16
TPM3-206ENST00000330188 LAMP1P11279 417 aa14.07□□□□□ -0.16
TPM3-206ENST00000330188 ADH5P11766 374 aa14.07□□□□□ -0.16
TPM3-206ENST00000330188 JUNBP17275 347 aaPredicted RBP14.07□□□□□ -0.16
TPM3-206ENST00000330188 EEF1B2P24534 225 aaKnown RBP14.07□□□□□ -0.16
TPM3-206ENST00000330188 IRS1P35568 1242 aa14.07□□□□□ -0.16
TPM3-206ENST00000330188 MAPK9P45984 424 aa14.07□□□□□ -0.16
TPM3-206ENST00000330188 E2F2Q14209 437 aa14.07□□□□□ -0.16
TPM3-206ENST00000330188 CTU2Q2VPK5 515 aaKnown RBP14.07□□□□□ -0.16
TPM3-206ENST00000330188 BROXQ5VW32 411 aa14.07□□□□□ -0.16
TPM3-206ENST00000330188 TMEM26Q6ZUK4 368 aa14.07□□□□□ -0.16
TPM3-206ENST00000330188 R3HCC1LQ7Z5L2 792 aaKnown RBP14.07□□□□□ -0.16
TPM3-206ENST00000330188 RBM23Q86U06 439 aaKnown RBP14.07□□□□□ -0.16
TPM3-206ENST00000330188 DCP2Q8IU60 420 aaKnown RBP14.07□□□□□ -0.16
TPM3-206ENST00000330188 C1orf52Q8N6N3 182 aaKnown RBP14.07□□□□□ -0.16
TPM3-206ENST00000330188 ARL10Q8N8L6 244 aa14.07□□□□□ -0.16
TPM3-206ENST00000330188 OR7G3Q8NG95 312 aa14.07□□□□□ -0.16
TPM3-206ENST00000330188 TBC1D20Q96BZ9 403 aa14.07□□□□□ -0.16
TPM3-206ENST00000330188 COG8Q96MW5 612 aa14.07□□□□□ -0.16
TPM3-206ENST00000330188 CDH7Q9ULB5 785 aa14.07□□□□□ -0.16
TPM3-206ENST00000330188 NUP210Q8TEM1 1887 aaPredicted RBP14.07□□□□□ -0.16
TPM3-206ENST00000330188 LOC100130705A0A1B0GUX0 176 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 ABCB7O75027 752 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 SH3BGRLO75368 114 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 MYO1DO94832 1006 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 SEMG1P04279 462 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 HNRNPA1P09651 372 aaKnown RBP eCLIP14.06□□□□□ -0.16
TPM3-206ENST00000330188 TPD52P55327 224 aaPredicted RBP14.06□□□□□ -0.16
TPM3-206ENST00000330188 NUP107P57740 925 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 HPCAP84074 193 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 MEP1AQ16819 746 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 C6orf141Q5SZD1 244 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 ERICH5Q6P6B1 374 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 SHQ1Q6PI26 577 aaKnown RBP14.06□□□□□ -0.16
TPM3-206ENST00000330188 DHRS4L2Q6PKH6 230 aa14.06□□□□□ -0.16
TPM3-206ENST00000330188 OR13F1Q8NGS4 319 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms