RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 MAGEB10Q96LZ2 347 aaPredicted RBP18.11■□□□□ 0.49
EXOSC3-201ENST00000327304 KIR3DX1Q9H7L2 352 aa18.11■□□□□ 0.49
EXOSC3-201ENST00000327304 AIG1Q9NVV5 245 aa18.11■□□□□ 0.49
EXOSC3-201ENST00000327304 ICKQ9UPZ9 632 aa18.11■□□□□ 0.49
EXOSC3-201ENST00000327304 GPR45Q9Y5Y3 372 aa18.11■□□□□ 0.49
EXOSC3-201ENST00000327304 ENTPD5O75356 428 aa18.1■□□□□ 0.49
EXOSC3-201ENST00000327304 CLDN9O95484 217 aa18.1■□□□□ 0.49
EXOSC3-201ENST00000327304 VIPP01282 170 aa18.1■□□□□ 0.49
EXOSC3-201ENST00000327304 ERGP11308 486 aa18.1■□□□□ 0.49
EXOSC3-201ENST00000327304 PNLIPRP1P54315 467 aa18.1■□□□□ 0.49
EXOSC3-201ENST00000327304 SMU1Q2TAY7 513 aa18.1■□□□□ 0.49
EXOSC3-201ENST00000327304 SYTL1Q8IYJ3 562 aa18.1■□□□□ 0.49
EXOSC3-201ENST00000327304 C2orf73Q8N5S3 287 aaPredicted RBP18.1■□□□□ 0.49
EXOSC3-201ENST00000327304 OR2T11Q8NH01 316 aa18.1■□□□□ 0.49
EXOSC3-201ENST00000327304 SAP25Q8TEE9 199 aa18.1■□□□□ 0.49
EXOSC3-201ENST00000327304 TSPEARQ8WU66 669 aa18.1■□□□□ 0.49
EXOSC3-201ENST00000327304 WDR60Q8WVS4 1066 aa18.1■□□□□ 0.49
EXOSC3-201ENST00000327304 GTPBP2Q9BX10 602 aaKnown RBP18.1■□□□□ 0.49
EXOSC3-201ENST00000327304 RNPEPL1Q9HAU8 725 aa18.1■□□□□ 0.49
EXOSC3-201ENST00000327304 POT1Q9NUX5 634 aa18.1■□□□□ 0.49
EXOSC3-201ENST00000327304 SPATA7Q9P0W8 599 aa18.1■□□□□ 0.49
EXOSC3-201ENST00000327304 GIMAP2Q9UG22 337 aa18.1■□□□□ 0.49
EXOSC3-201ENST00000327304 BBIP1A8MTZ0 92 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 SLC28A1O00337 649 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 CER1O95813 267 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 SYPP08247 313 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 ENGP17813 658 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 EPORP19235 508 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 PKLRP30613 574 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 MTTPP55157 894 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 GPR18Q14330 331 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 RPS6KA2Q15349 733 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 ATP6AP1LQ52LC2 224 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 TCHHL1Q5QJ38 904 aaPredicted RBP18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 C6orf136Q5SQH8 315 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 OGFOD3Q6PK18 319 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 PAOXQ6QHF9 649 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 FUNDC1Q8IVP5 155 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 LRRC56Q8IYG6 542 aaPredicted RBP18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 FBXW8Q8N3Y1 598 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 ENDOVQ8N8Q3 282 aaKnown RBP18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 OR56A3Q8NH54 315 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 MED8Q96G25 268 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 SERPINI1Q99574 410 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 BRINP2Q9C0B6 783 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 DCLRE1BQ9H816 532 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 DNAJC11Q9NVH1 559 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 MUC6Q6W4X9 2439 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 E7ENX8 843 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 KHNYNO15037 678 aaKnown RBP18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 DFNA5O60443 496 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 HTR6P50406 440 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 CCT8P50990 548 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 TBPL1P62380 186 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 TAP2Q03519 686 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 CYP2A13Q16696 494 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 MMEL1Q495T6 779 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 PDCD4Q53EL6 469 aaKnown RBP18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 SCIMPQ6UWF3 145 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 HACD2Q6Y1H2 254 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 TRIM46Q7Z4K8 759 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 SLC9B2Q86UD5 537 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 C17orf82Q86X59 251 aaPredicted RBP18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 ARL14Q8N4G2 192 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 LINC01555Q8NAE3 123 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 USP7Q93009 1102 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 PPP3R2Q96LZ3 170 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 INTS7Q9NVH2 962 aaKnown RBP18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 FAM86C1Q9NVL1 165 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 RNF11Q9Y3C5 154 aa18.09■□□□□ 0.49
EXOSC3-201ENST00000327304 YKT6O15498 198 aa18.08■□□□□ 0.48
EXOSC3-201ENST00000327304 RGS14O43566 566 aa18.08■□□□□ 0.48
EXOSC3-201ENST00000327304 NRP2O60462 931 aa18.08■□□□□ 0.48
EXOSC3-201ENST00000327304 ULK1O75385 1050 aa18.08■□□□□ 0.48
EXOSC3-201ENST00000327304 RETP07949 1114 aa18.08■□□□□ 0.48
EXOSC3-201ENST00000327304 RAB28P51157 221 aa18.08■□□□□ 0.48
EXOSC3-201ENST00000327304 ACTR3P61158 418 aa18.08■□□□□ 0.48
EXOSC3-201ENST00000327304 HHEXQ03014 270 aa18.08■□□□□ 0.48
EXOSC3-201ENST00000327304 EMX2Q04743 252 aa18.08■□□□□ 0.48
EXOSC3-201ENST00000327304 TSTA3Q13630 321 aaPredicted RBP18.08■□□□□ 0.48
EXOSC3-201ENST00000327304 ARHGAP19Q14CB8 494 aa18.08■□□□□ 0.48
EXOSC3-201ENST00000327304 ABRAXAS2Q15018 415 aa18.08■□□□□ 0.48
EXOSC3-201ENST00000327304 C6orf132Q5T0Z8 1188 aa18.08■□□□□ 0.48
EXOSC3-201ENST00000327304 REP15Q6BDI9 236 aa18.08■□□□□ 0.48
EXOSC3-201ENST00000327304 SUSD1Q6UWL2 747 aa18.08■□□□□ 0.48
EXOSC3-201ENST00000327304 ZNF761Q86XN6 746 aaPredicted RBP18.08■□□□□ 0.48
EXOSC3-201ENST00000327304 SNX31Q8N9S9 440 aa18.08■□□□□ 0.48
EXOSC3-201ENST00000327304 L3MBTL4Q8NA19 623 aa18.08■□□□□ 0.48
EXOSC3-201ENST00000327304 LCN9Q8WX39 176 aa18.08■□□□□ 0.48
EXOSC3-201ENST00000327304 ATOH1Q92858 354 aaPredicted RBP18.08■□□□□ 0.48
EXOSC3-201ENST00000327304 NPAS2Q99743 824 aa18.08■□□□□ 0.48
EXOSC3-201ENST00000327304 ACTR8Q9H981 624 aa18.08■□□□□ 0.48
EXOSC3-201ENST00000327304 WDR41Q9HAD4 459 aa18.08■□□□□ 0.48
EXOSC3-201ENST00000327304 SLC22A14Q9Y267 594 aa18.08■□□□□ 0.48
EXOSC3-201ENST00000327304 CCL27Q9Y4X3 112 aa18.08■□□□□ 0.48
EXOSC3-201ENST00000327304 ARID1BQ8NFD5 2236 aaPredicted RBP18.08■□□□□ 0.48
EXOSC3-201ENST00000327304 FBP2O00757 339 aa18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 LSM1O15116 133 aaKnown RBP18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 UGDHO60701 494 aa18.07■□□□□ 0.48
EXOSC3-201ENST00000327304 KRT6AP02538 564 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms