RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 SAMD4AQ9UPU9 718 aaKnown RBP20.71■□□□□ 0.91
LIMS2-201ENST00000324938 RWDD3Q9Y3V2 267 aa20.71■□□□□ 0.91
LIMS2-201ENST00000324938 MAGEB17A8MXT2 336 aa20.7■□□□□ 0.9
LIMS2-201ENST00000324938 EPN2O95208 641 aa20.7■□□□□ 0.9
LIMS2-201ENST00000324938 GPX2P18283 190 aa20.7■□□□□ 0.9
LIMS2-201ENST00000324938 ITGB7P26010 798 aa20.7■□□□□ 0.9
LIMS2-201ENST00000324938 DCTP40126 519 aa20.7■□□□□ 0.9
LIMS2-201ENST00000324938 FBXO46Q6PJ61 603 aaPredicted RBP20.7■□□□□ 0.9
LIMS2-201ENST00000324938 SPRED2Q7Z698 418 aa20.7■□□□□ 0.9
LIMS2-201ENST00000324938 ETFBKMTQ8IXQ9 262 aa20.7■□□□□ 0.9
LIMS2-201ENST00000324938 HS3ST5Q8IZT8 346 aa20.7■□□□□ 0.9
LIMS2-201ENST00000324938 NXPE3Q969Y0 559 aa20.7■□□□□ 0.9
LIMS2-201ENST00000324938 ZCCHC2Q9C0B9 1178 aaKnown RBP20.7■□□□□ 0.9
LIMS2-201ENST00000324938 FAM118AQ9NWS6 357 aa20.7■□□□□ 0.9
LIMS2-201ENST00000324938 COQ6Q9Y2Z9 468 aa20.7■□□□□ 0.9
LIMS2-201ENST00000324938 LINC01553A4QN01 128 aa20.69■□□□□ 0.9
LIMS2-201ENST00000324938 SCAMP2O15127 329 aaKnown RBP20.69■□□□□ 0.9
LIMS2-201ENST00000324938 LILRB5O75023 590 aa20.69■□□□□ 0.9
LIMS2-201ENST00000324938 C1orf105O95561 183 aa20.69■□□□□ 0.9
LIMS2-201ENST00000324938 ETHE1O95571 254 aa20.69■□□□□ 0.9
LIMS2-201ENST00000324938 ENGP17813 658 aa20.69■□□□□ 0.9
LIMS2-201ENST00000324938 TTKP33981 857 aa20.69■□□□□ 0.9
LIMS2-201ENST00000324938 ASMTP46597 345 aa20.69■□□□□ 0.9
LIMS2-201ENST00000324938 PNLIPRP1P54315 467 aa20.69■□□□□ 0.9
LIMS2-201ENST00000324938 RAE1P78406 368 aaKnown RBP20.69■□□□□ 0.9
LIMS2-201ENST00000324938 ERICH5Q6P6B1 374 aa20.69■□□□□ 0.9
LIMS2-201ENST00000324938 ZNF765Q7L2R6 523 aa20.69■□□□□ 0.9
LIMS2-201ENST00000324938 THAP5Q7Z6K1 395 aa20.69■□□□□ 0.9
LIMS2-201ENST00000324938 OR7G3Q8NG95 312 aa20.69■□□□□ 0.9
LIMS2-201ENST00000324938 AASDHPPTQ9NRN7 309 aa20.69■□□□□ 0.9
LIMS2-201ENST00000324938 PRRT4C9JH25 899 aa20.69■□□□□ 0.9
LIMS2-201ENST00000324938 CALRP27797 417 aaKnown RBP20.69■□□□□ 0.9
LIMS2-201ENST00000324938 ELK4P28324 431 aa20.69■□□□□ 0.9
LIMS2-201ENST00000324938 ELP6Q0PNE2 266 aa20.69■□□□□ 0.9
LIMS2-201ENST00000324938 MESP2Q0VG99 397 aa20.69■□□□□ 0.9
LIMS2-201ENST00000324938 ADNP2Q6IQ32 1131 aa20.69■□□□□ 0.9
LIMS2-201ENST00000324938 SLCO4C1Q6ZQN7 724 aa20.69■□□□□ 0.9
LIMS2-201ENST00000324938 TMEM179BQ7Z7N9 219 aa20.69■□□□□ 0.9
LIMS2-201ENST00000324938 CLVS1Q8IUQ0 354 aaPredicted RBP20.69■□□□□ 0.9
LIMS2-201ENST00000324938 ZZZ3Q8IYH5 903 aa20.69■□□□□ 0.9
LIMS2-201ENST00000324938 CHPFQ8IZ52 775 aa20.69■□□□□ 0.9
LIMS2-201ENST00000324938 C8orf59Q8N0T1 100 aaPredicted RBP20.69■□□□□ 0.9
LIMS2-201ENST00000324938 C1orf52Q8N6N3 182 aaKnown RBP20.69■□□□□ 0.9
LIMS2-201ENST00000324938 ARRDC3Q96B67 414 aa20.69■□□□□ 0.9
LIMS2-201ENST00000324938 ING2Q9H160 280 aa20.69■□□□□ 0.9
LIMS2-201ENST00000324938 MAPRE3Q9UPY8 281 aa20.69■□□□□ 0.9
LIMS2-201ENST00000324938 KCNE2Q9Y6J6 123 aa20.69■□□□□ 0.9
LIMS2-201ENST00000324938 C5orf67F2Z3F1 127 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 NOBOXO60393 691 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 C1QCP02747 245 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 YAP1P46937 504 aaKnown RBP20.68■□□□□ 0.9
LIMS2-201ENST00000324938 VMACQ2NL98 169 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 SPIN4Q56A73 249 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 CPZQ66K79 652 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 ZCCHC8Q6NZY4 707 aaKnown RBP20.68■□□□□ 0.9
LIMS2-201ENST00000324938 CAMKMTQ7Z624 323 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 ZNF555Q8NEP9 628 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 TMIEQ8NEW7 156 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 HUS1BQ8NHY5 278 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 CDC26Q8NHZ8 85 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 ZNF480Q8WV37 535 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 NEIL2Q969S2 332 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 TBC1D20Q96BZ9 403 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 ISOC1Q96CN7 298 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 NUS1Q96E22 293 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 AMBRA1Q9C0C7 1298 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 TIMMDC1Q9NPL8 285 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 ERVK-11Q9UQG0 969 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 ALPK3Q96L96 1907 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 C2orf16Q68DN1 1984 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 E2F6O75461 281 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 KCNK5O95279 499 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 LAMP1P11279 417 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 TBPL1P62380 186 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 PMS2P3Q13401 168 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 SF1Q15637 639 aaKnown RBP20.68■□□□□ 0.9
LIMS2-201ENST00000324938 HNRNPA1L2Q32P51 320 aaKnown RBP20.68■□□□□ 0.9
LIMS2-201ENST00000324938 C9orf64Q5T6V5 341 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 PSRC1Q6PGN9 363 aaPredicted RBP20.68■□□□□ 0.9
LIMS2-201ENST00000324938 ZNF773Q6PK81 442 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 ZNF621Q6ZSS3 439 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 TRIM74Q86UV6 250 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 HIPK1Q86Z02 1210 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 ZDHHC21Q8IVQ6 265 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 CLECL1Q8IZS7 167 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 CHTF18Q8WVB6 975 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 OR8D1Q8WZ84 308 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 DUSP26Q9BV47 211 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 POLR1BQ9H9Y6 1135 aa20.68■□□□□ 0.9
LIMS2-201ENST00000324938 EDDM13A0A1B0GTR0 161 aa20.67■□□□□ 0.9
LIMS2-201ENST00000324938 K7ESM1 405 aa20.67■□□□□ 0.9
LIMS2-201ENST00000324938 YY2O15391 372 aa20.67■□□□□ 0.9
LIMS2-201ENST00000324938 CCR3P51677 355 aa20.67■□□□□ 0.9
LIMS2-201ENST00000324938 BIRC2Q13490 618 aa20.67■□□□□ 0.9
LIMS2-201ENST00000324938 FNDC3BQ53EP0 1204 aaKnown RBP20.67■□□□□ 0.9
LIMS2-201ENST00000324938 LRRC23Q53EV4 343 aaPredicted RBP20.67■□□□□ 0.9
LIMS2-201ENST00000324938 RBM48Q5RL73 367 aaKnown RBP20.67■□□□□ 0.9
LIMS2-201ENST00000324938 CAPN13Q6MZZ7 669 aaPredicted RBP20.67■□□□□ 0.9
LIMS2-201ENST00000324938 KCTD8Q6ZWB6 473 aa20.67■□□□□ 0.9
LIMS2-201ENST00000324938 TMPRSS11BQ86T26 416 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms