RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 BCAT2O15382 392 aaPredicted RBP12.32□□□□□ -0.44
DDX39A-202ENST00000324340 UGDHO60701 494 aa12.32□□□□□ -0.44
DDX39A-202ENST00000324340 OR4F21O95013 312 aa12.32□□□□□ -0.44
DDX39A-202ENST00000324340 EML2O95834 649 aa12.32□□□□□ -0.44
DDX39A-202ENST00000324340 FAM58BPP0C7Q3 252 aa12.32□□□□□ -0.44
DDX39A-202ENST00000324340 ZNF23P17027 643 aa12.32□□□□□ -0.44
DDX39A-202ENST00000324340 NDUFS1P28331 727 aa12.32□□□□□ -0.44
DDX39A-202ENST00000324340 ALDH3B2P48448 385 aa12.32□□□□□ -0.44
DDX39A-202ENST00000324340 AFF3P51826 1226 aaKnown RBP12.32□□□□□ -0.44
DDX39A-202ENST00000324340 AQP4P55087 323 aa12.32□□□□□ -0.44
DDX39A-202ENST00000324340 TBPL1P62380 186 aa12.32□□□□□ -0.44
DDX39A-202ENST00000324340 NAE1Q13564 534 aa12.32□□□□□ -0.44
DDX39A-202ENST00000324340 SLC9B1Q4ZJI4 515 aa12.32□□□□□ -0.44
DDX39A-202ENST00000324340 VWA5B1Q5TIE3 1220 aa12.32□□□□□ -0.44
DDX39A-202ENST00000324340 METTL21CQ5VZV1 264 aa12.32□□□□□ -0.44
DDX39A-202ENST00000324340 CAPN13Q6MZZ7 669 aaPredicted RBP12.32□□□□□ -0.44
DDX39A-202ENST00000324340 LAYNQ6UX15 382 aa12.32□□□□□ -0.44
DDX39A-202ENST00000324340 EFL1Q7Z2Z2 1120 aaKnown RBP12.32□□□□□ -0.44
DDX39A-202ENST00000324340 MILR1Q7Z6M3 343 aa12.32□□□□□ -0.44
DDX39A-202ENST00000324340 FBXL6Q8N531 539 aa12.32□□□□□ -0.44
DDX39A-202ENST00000324340 L3MBTL4Q8NA19 623 aa12.32□□□□□ -0.44
DDX39A-202ENST00000324340 ABTB1Q969K4 478 aaPredicted RBP12.32□□□□□ -0.44
DDX39A-202ENST00000324340 COX4I2Q96KJ9 171 aa12.32□□□□□ -0.44
DDX39A-202ENST00000324340 MAGEB10Q96LZ2 347 aaPredicted RBP12.32□□□□□ -0.44
DDX39A-202ENST00000324340 CAMK1GQ96NX5 476 aa12.32□□□□□ -0.44
DDX39A-202ENST00000324340 FERD3LQ96RJ6 166 aa12.32□□□□□ -0.44
DDX39A-202ENST00000324340 KCNA7Q96RP8 456 aa12.32□□□□□ -0.44
DDX39A-202ENST00000324340 CGREF1Q99674 301 aa12.32□□□□□ -0.44
DDX39A-202ENST00000324340 RAB11FIP5Q9BXF6 653 aa12.32□□□□□ -0.44
DDX39A-202ENST00000324340 NUF2Q9BZD4 464 aa12.32□□□□□ -0.44
DDX39A-202ENST00000324340 MIR1-1HGQ9H1L0 117 aa12.32□□□□□ -0.44
DDX39A-202ENST00000324340 KIR3DX1Q9H7L2 352 aa12.32□□□□□ -0.44
DDX39A-202ENST00000324340 TMEM165Q9HC07 324 aa12.32□□□□□ -0.44
DDX39A-202ENST00000324340 IMP3Q9NV31 184 aaKnown RBP12.32□□□□□ -0.44
DDX39A-202ENST00000324340 RSL24D1Q9UHA3 163 aaKnown RBP12.32□□□□□ -0.44
DDX39A-202ENST00000324340 TRPS1Q9UHF7 1281 aa12.32□□□□□ -0.44
DDX39A-202ENST00000324340 CEPT1Q9Y6K0 416 aa12.32□□□□□ -0.44
DDX39A-202ENST00000324340 COLEC10Q9Y6Z7 277 aa12.32□□□□□ -0.44
DDX39A-202ENST00000324340 FANCMQ8IYD8 2048 aa12.32□□□□□ -0.44
DDX39A-202ENST00000324340 OR52A4PA6NMU1 304 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 ZNF839A8K0R7 811 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 PRR5-ARHGAP8B1AHC4 643 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 SDHDO14521 159 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 DNAJA2O60884 412 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 SERPINB7O75635 380 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 CAPN1P07384 714 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 HGFP14210 728 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 JUNDP17535 347 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 XRCC1P18887 633 aaPredicted RBP12.31□□□□□ -0.44
DDX39A-202ENST00000324340 CDH2P19022 906 aaPredicted RBP12.31□□□□□ -0.44
DDX39A-202ENST00000324340 ITPKAP23677 461 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 CNR2P34972 360 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 CASP2P42575 452 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 CCNIQ14094 377 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 ZNF528Q3MIS6 628 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 LYSMD4Q5XG99 296 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 IYDQ6PHW0 289 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 TREML1Q86YW5 311 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 SYTL1Q8IYJ3 562 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 RAB42Q8N4Z0 105 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 SCAIQ8N9R8 606 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 SNX31Q8N9S9 440 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 SETD7Q8WTS6 366 aaKnown RBP12.31□□□□□ -0.44
DDX39A-202ENST00000324340 TWIST2Q8WVJ9 160 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 ZFPM2Q8WW38 1151 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 ATP6V1E2Q96A05 226 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 MED8Q96G25 268 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 ZC3H10Q96K80 434 aaKnown RBP12.31□□□□□ -0.44
DDX39A-202ENST00000324340 CDK15Q96Q40 435 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 CCT7Q99832 543 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 LRRC61Q9BV99 259 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 SLC29A3Q9BZD2 475 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 TWSG1Q9GZX9 223 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 TUBB1Q9H4B7 451 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 ERVMER34-1Q9H9K5 563 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 TBC1D23Q9NUY8 699 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 GIN1Q9NXP7 522 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 TAAR2Q9P1P5 351 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 ZNF624Q9P2J8 865 aaPredicted RBP12.31□□□□□ -0.44
DDX39A-202ENST00000324340 APOBEC3BQ9UH17 382 aaKnown RBP12.31□□□□□ -0.44
DDX39A-202ENST00000324340 PRPF19Q9UMS4 504 aaKnown RBP12.31□□□□□ -0.44
DDX39A-202ENST00000324340 TDRKHQ9Y2W6 561 aaKnown RBP12.31□□□□□ -0.44
DDX39A-202ENST00000324340 TP53BP1Q12888 1972 aaPredicted RBP12.31□□□□□ -0.44
DDX39A-202ENST00000324340 THADAQ6YHU6 1953 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 CACNA1IQ9P0X4 2223 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 TTC28Q96AY4 2481 aa12.31□□□□□ -0.44
DDX39A-202ENST00000324340 KCNE1BA0A087WTH5 132 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 KIR2DS5A0A0G2JLQ3 304 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 A0A0G2JNG1 304 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 A0A1B0GTW7 788 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 HTR3EA5X5Y0 456 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 OR5K4A6NMS3 321 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 KIR2DS3K7RE56 304 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 HRO43593 1189 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 KDM1AO60341 852 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 PRAMEF4O60810 478 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 GPR37L1O60883 481 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 OR6B1O95007 311 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 CLDN9O95484 217 aa12.3□□□□□ -0.44
DDX39A-202ENST00000324340 CTSEP14091 401 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms