RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 A0A0J9YYE9 177 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 EIF1AYO14602 144 aaKnown RBP9.5□□□□□ -0.89
COL12A1-201ENST00000322507 EDF1O60869 148 aaKnown RBP9.5□□□□□ -0.89
COL12A1-201ENST00000322507 RDH16O75452 317 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 DRD4P21917 467 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 EIF1AXP47813 144 aaKnown RBP9.5□□□□□ -0.89
COL12A1-201ENST00000322507 PPP3R1P63098 170 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 ZNF33AQ06730 810 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 PARGQ86W56 976 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 ZC3HC1Q86WB0 502 aaKnown RBP9.5□□□□□ -0.89
COL12A1-201ENST00000322507 SLC41A1Q8IVJ1 513 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 PRELID2Q8N945 189 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 IL17RBQ9NRM6 502 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 ARFGEF2Q9Y6D5 1785 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 KNTC1P50748 2209 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 SYN3O14994 580 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 PRNPP04156 253 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 CALCRP30988 508 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 NDST2P52849 883 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 CSNK2A1P68400 391 aaPredicted RBP9.5□□□□□ -0.89
COL12A1-201ENST00000322507 RALGPS1Q5JS13 557 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 CSNK2A3Q8NEV1 391 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 PLD4Q96BZ4 506 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 ZNF354BQ96LW1 612 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 CCDC32Q9BV29 185 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 TGIF2Q9GZN2 237 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 DCDC2BA2VCK2 349 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 ZNF99A8MXY4 864 aaPredicted RBP9.5□□□□□ -0.89
COL12A1-201ENST00000322507 ARPC2O15144 300 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 ENTPD6O75354 484 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 SCGB2A1O75556 95 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 PROS1P07225 676 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 GNMTQ14749 295 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 GALNTL5Q7Z4T8 443 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 ST7LQ8TDW4 575 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 KCTD7Q96MP8 289 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 HEBP1Q9NRV9 189 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 MKS1Q9NXB0 559 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 CYP8B1Q9UNU6 501 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 SPATA31C2B4DYI2 1134 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 NPHS1O60500 1241 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 CD72P21854 359 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 MTHFRP42898 656 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 MAGEA11P43364 429 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 SLC34A3Q8N130 599 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 SNRNP25Q9BV90 132 aaKnown RBP9.5□□□□□ -0.89
COL12A1-201ENST00000322507 UNC93B1Q9H1C4 597 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 PLEKHA1Q9HB21 404 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 ZFP14Q9HCL3 533 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 CHRNB2P17787 502 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 SLC7A2P52569 658 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 TANGO2Q6ICL3 276 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 SLC30A10Q6XR72 485 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 KCTD8Q6ZWB6 473 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 WDR18Q9BV38 432 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 COPS7AQ9UBW8 275 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 PSMD10O75832 226 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 TPH1P17752 444 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 PKLRP30613 574 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 PBX3P40426 434 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 TBC1D25Q3MII6 688 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 RAP1GAP2Q684P5 730 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 LCLAT1Q6UWP7 414 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 KCTD13Q8WZ19 329 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 MYO19Q96H55 970 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 RPS10P5Q9NQ39 176 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 PCDHGC3Q9UN70 934 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 PCDHGB5Q9Y5G0 923 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 SHROOM3Q8TF72 1996 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 SHPRHQ149N8 1683 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 GNAZP19086 355 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 CLNKQ7Z7G1 428 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 ZNF565Q8N9K5 539 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 BLOC1S4Q9NUP1 217 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 SLC25A14O95258 325 aaPredicted RBP9.5□□□□□ -0.89
COL12A1-201ENST00000322507 EEF1A2Q05639 463 aaKnown RBP9.5□□□□□ -0.89
COL12A1-201ENST00000322507 LDLRAP1Q5SW96 308 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 SAMD7Q7Z3H4 446 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 NUDT9Q9BW91 350 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 PDE10AQ9Y233 779 aa9.5□□□□□ -0.89
COL12A1-201ENST00000322507 NDST3O95803 873 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 KCNJ2P63252 427 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 DCST1Q5T197 706 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 HASPINQ8TF76 798 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 SLITRK5O94991 958 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 TCEA1P23193 301 aaKnown RBP9.49□□□□□ -0.89
COL12A1-201ENST00000322507 CD97P48960 835 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 PEA15Q15121 130 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 PPP2R2DQ66LE6 453 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 CPA6Q8N4T0 437 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 C11orf84Q9BUA3 381 aaPredicted RBP9.49□□□□□ -0.89
COL12A1-201ENST00000322507 DNTTIP1Q9H147 329 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 CREBZFQ9NS37 354 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 TAS2R9Q9NYW1 312 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 MRPS23Q9Y3D9 190 aaKnown RBP9.49□□□□□ -0.89
COL12A1-201ENST00000322507 ADAM18Q9Y3Q7 739 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 SLC17A1Q14916 467 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 TIGD6Q17RP2 521 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 RNF212Q495C1 297 aa9.49□□□□□ -0.89
COL12A1-201ENST00000322507 FAM35AQ86V20 835 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms