RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 SGK2Q9HBY8 427 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 ATP11BQ9Y2G3 1177 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 IGLV3-16A0A075B6K0 115 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 GNG14A0A1W2PPG7 69 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 LEFTY1O75610 366 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 PSMB9P28065 219 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 CLK3P49761 638 aaKnown RBP16.85■□□□□ 0.29
COL9A1-201ENST00000320755 CTSCP53634 463 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 PTPN5P54829 565 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 SLC7A9P82251 487 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.85■□□□□ 0.29
COL9A1-201ENST00000320755 LAIR1Q6GTX8 287 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 RNF165Q6ZSG1 346 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 B3GNT8Q7Z7M8 397 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 ZZZ3Q8IYH5 903 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 TTC29Q8NA56 475 aaPredicted RBP16.85■□□□□ 0.29
COL9A1-201ENST00000320755 OR52E4Q8NGH9 312 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 OR2A12Q8NGT7 310 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 DNAJB8Q8NHS0 232 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 RNF208Q9H0X6 261 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 TPT1P8Q9HAU6 139 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 INHBBP09529 407 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 XPAP23025 273 aaPredicted RBP16.85■□□□□ 0.29
COL9A1-201ENST00000320755 CCR3P51677 355 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 WNT3P56703 355 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 GGTA1PQ4G0N0 100 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 DDX53Q86TM3 631 aaKnown RBP16.85■□□□□ 0.29
COL9A1-201ENST00000320755 FAM9CQ8IZT9 166 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 RORBQ92753 470 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 FKBP10Q96AY3 582 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 ZNF510Q9Y2H8 683 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 TMED5Q9Y3A6 229 aa16.85■□□□□ 0.29
COL9A1-201ENST00000320755 ZNF99A8MXY4 864 aaPredicted RBP16.84■□□□□ 0.29
COL9A1-201ENST00000320755 TTC34A8MYJ7 566 aa16.84■□□□□ 0.29
COL9A1-201ENST00000320755 BOLA2-SMG1P6H3BVE0 249 aa16.84■□□□□ 0.29
COL9A1-201ENST00000320755 SAP18O00422 153 aaKnown RBP16.84■□□□□ 0.29
COL9A1-201ENST00000320755 FADS2O95864 444 aaKnown RBP16.84■□□□□ 0.29
COL9A1-201ENST00000320755 ANXA4P09525 319 aaPredicted RBP16.84■□□□□ 0.29
COL9A1-201ENST00000320755 PABPC1P11940 636 aaKnown RBP16.84■□□□□ 0.29
COL9A1-201ENST00000320755 HOXB9P17482 250 aaPredicted RBP16.84■□□□□ 0.29
COL9A1-201ENST00000320755 TNFRSF1BP20333 461 aa16.84■□□□□ 0.29
COL9A1-201ENST00000320755 POLR2LP62875 67 aaKnown RBP16.84■□□□□ 0.29
COL9A1-201ENST00000320755 AGTRAPQ6RW13 159 aa16.84■□□□□ 0.29
COL9A1-201ENST00000320755 SLC16A12Q6ZSM3 486 aa16.84■□□□□ 0.29
COL9A1-201ENST00000320755 BTLAQ7Z6A9 289 aa16.84■□□□□ 0.29
COL9A1-201ENST00000320755 PTOV1Q86YD1 416 aa16.84■□□□□ 0.29
COL9A1-201ENST00000320755 TMC8Q8IU68 726 aa16.84■□□□□ 0.29
COL9A1-201ENST00000320755 TMCO5AQ8N6Q1 288 aa16.84■□□□□ 0.29
COL9A1-201ENST00000320755 ZNF540Q8NDQ6 660 aa16.84■□□□□ 0.29
COL9A1-201ENST00000320755 ABHD11Q8NFV4 315 aa16.84■□□□□ 0.29
COL9A1-201ENST00000320755 MUL1Q969V5 352 aa16.84■□□□□ 0.29
COL9A1-201ENST00000320755 TMEM159Q96B96 161 aa16.84■□□□□ 0.29
COL9A1-201ENST00000320755 ASPSCR1Q9BZE9 553 aa16.84■□□□□ 0.29
COL9A1-201ENST00000320755 RAPGEFL1Q9UHV5 662 aa16.84■□□□□ 0.29
COL9A1-201ENST00000320755 GMEB1Q9Y692 573 aa16.84■□□□□ 0.29
COL9A1-201ENST00000320755 FADS2P1A8MWK0 482 aa16.84■□□□□ 0.29
COL9A1-201ENST00000320755 SLC16A8O95907 504 aa16.84■□□□□ 0.29
COL9A1-201ENST00000320755 OPN1SWP03999 348 aa16.84■□□□□ 0.29
COL9A1-201ENST00000320755 SRSF11Q05519 484 aaKnown RBP16.84■□□□□ 0.29
COL9A1-201ENST00000320755 RFX4Q33E94 735 aa16.84■□□□□ 0.29
COL9A1-201ENST00000320755 PLEKHS1Q5SXH7 462 aa16.84■□□□□ 0.29
COL9A1-201ENST00000320755 Q6ZPB1 254 aaPredicted RBP16.84■□□□□ 0.29
COL9A1-201ENST00000320755 SNX29P2Q8IUI4 249 aa16.84■□□□□ 0.29
COL9A1-201ENST00000320755 RAVER1Q8IY67 606 aaKnown RBP16.84■□□□□ 0.29
COL9A1-201ENST00000320755 ZNF296Q8WUU4 475 aaPredicted RBP16.84■□□□□ 0.29
COL9A1-201ENST00000320755 LZICQ8WZA0 190 aa16.84■□□□□ 0.29
COL9A1-201ENST00000320755 GLMNQ92990 594 aa16.84■□□□□ 0.29
COL9A1-201ENST00000320755 CNDP2Q96KP4 475 aaKnown RBP16.84■□□□□ 0.29
COL9A1-201ENST00000320755 YME1L1Q96TA2 773 aa16.84■□□□□ 0.29
COL9A1-201ENST00000320755 DUSP26Q9BV47 211 aa16.84■□□□□ 0.29
COL9A1-201ENST00000320755 EMILIN2Q9BXX0 1053 aa16.84■□□□□ 0.29
COL9A1-201ENST00000320755 GPN2Q9H9Y4 310 aaPredicted RBP16.84■□□□□ 0.29
COL9A1-201ENST00000320755 KRT84Q9NSB2 600 aa16.84■□□□□ 0.29
COL9A1-201ENST00000320755 FZD4Q9ULV1 537 aa16.84■□□□□ 0.29
COL9A1-201ENST00000320755 GABRR3A8MPY1 467 aa16.83■□□□□ 0.29
COL9A1-201ENST00000320755 SLC16A6O15403 523 aa16.83■□□□□ 0.29
COL9A1-201ENST00000320755 OCM2P0CE71 109 aa16.83■□□□□ 0.29
COL9A1-201ENST00000320755 OCMP0CE72 109 aaPredicted RBP16.83■□□□□ 0.29
COL9A1-201ENST00000320755 PDHA2P29803 388 aa16.83■□□□□ 0.29
COL9A1-201ENST00000320755 OPRL1P41146 370 aa16.83■□□□□ 0.29
COL9A1-201ENST00000320755 AP1S2P56377 157 aa16.83■□□□□ 0.29
COL9A1-201ENST00000320755 TOP3AQ13472 1001 aaPredicted RBP16.83■□□□□ 0.29
COL9A1-201ENST00000320755 CYP27C1Q4G0S4 372 aa16.83■□□□□ 0.29
COL9A1-201ENST00000320755 CDKL4Q5MAI5 379 aa16.83■□□□□ 0.29
COL9A1-201ENST00000320755 SERPINA11Q86U17 422 aa16.83■□□□□ 0.29
COL9A1-201ENST00000320755 ZNF641Q96N77 438 aaPredicted RBP16.83■□□□□ 0.29
COL9A1-201ENST00000320755 ARMC7Q9H6L4 198 aa16.83■□□□□ 0.29
COL9A1-201ENST00000320755 AMBNQ9NP70 447 aa16.83■□□□□ 0.29
COL9A1-201ENST00000320755 FAIMQ9NVQ4 179 aa16.83■□□□□ 0.29
COL9A1-201ENST00000320755 MICAL3Q7RTP6 2002 aa16.83■□□□□ 0.29
COL9A1-201ENST00000320755 SGTAO43765 313 aa16.83■□□□□ 0.28
COL9A1-201ENST00000320755 SCN2BO60939 215 aa16.83■□□□□ 0.28
COL9A1-201ENST00000320755 ARHGEF15O94989 841 aa16.83■□□□□ 0.28
COL9A1-201ENST00000320755 ACRP10323 421 aa16.83■□□□□ 0.28
COL9A1-201ENST00000320755 TYRP14679 529 aa16.83■□□□□ 0.28
COL9A1-201ENST00000320755 PCMT1P22061 227 aa16.83■□□□□ 0.28
COL9A1-201ENST00000320755 TRPC1P48995 793 aa16.83■□□□□ 0.28
COL9A1-201ENST00000320755 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.83■□□□□ 0.28
COL9A1-201ENST00000320755 CPTPQ5TA50 214 aa16.83■□□□□ 0.28
COL9A1-201ENST00000320755 OR4K1Q8NGD4 311 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms