RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 ATXN7L2Q5T6C5 722 aaPredicted RBP13.04□□□□□ -0.32
SKA3-202ENST00000314759 PPP2R2DQ66LE6 453 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 TUBA3EQ6PEY2 450 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 PTOV1Q86YD1 416 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 APIPQ96GX9 242 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 SPATA17Q96L03 361 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 HHIPQ96QV1 700 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 REEP1Q9H902 201 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 AMBNQ9NP70 447 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 FBXL12Q9NXK8 326 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 LHX3Q9UBR4 397 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 RPS6KA6Q9UK32 745 aa13.04□□□□□ -0.32
SKA3-202ENST00000314759 SYN3O14994 580 aa13.03□□□□□ -0.32
SKA3-202ENST00000314759 PTTG1O95997 202 aa13.03□□□□□ -0.32
SKA3-202ENST00000314759 VIPP01282 170 aa13.03□□□□□ -0.32
SKA3-202ENST00000314759 KRT8P05787 483 aa13.03□□□□□ -0.32
SKA3-202ENST00000314759 ZXDCQ2QGD7 858 aaPredicted RBP13.03□□□□□ -0.32
SKA3-202ENST00000314759 IQCCQ4KMZ1 466 aa13.03□□□□□ -0.32
SKA3-202ENST00000314759 CXorf57Q6NSI4 855 aaKnown RBP13.03□□□□□ -0.32
SKA3-202ENST00000314759 HRASLS5Q96KN8 279 aa13.03□□□□□ -0.32
SKA3-202ENST00000314759 CDADC1Q9BWV3 514 aa13.03□□□□□ -0.32
SKA3-202ENST00000314759 GPR62Q9BZJ7 368 aa13.03□□□□□ -0.32
SKA3-202ENST00000314759 REXO4Q9GZR2 422 aaKnown RBP13.03□□□□□ -0.32
SKA3-202ENST00000314759 RETREG1Q9H6L5 497 aa13.03□□□□□ -0.32
SKA3-202ENST00000314759 RDH14Q9HBH5 336 aa13.03□□□□□ -0.32
SKA3-202ENST00000314759 IL26Q9NPH9 171 aa13.03□□□□□ -0.32
SKA3-202ENST00000314759 PIKFYVEQ9Y2I7 2098 aa13.03□□□□□ -0.32
SKA3-202ENST00000314759 KMOO15229 486 aa13.03□□□□□ -0.32
SKA3-202ENST00000314759 ARHGEF15O94989 841 aa13.03□□□□□ -0.32
SKA3-202ENST00000314759 CA8P35219 290 aa13.03□□□□□ -0.32
SKA3-202ENST00000314759 CTSKP43235 329 aa13.03□□□□□ -0.32
SKA3-202ENST00000314759 TIGD6Q17RP2 521 aa13.03□□□□□ -0.32
SKA3-202ENST00000314759 ATAD3CQ5T2N8 411 aa13.03□□□□□ -0.32
SKA3-202ENST00000314759 NXNL2Q5VZ03 156 aa13.03□□□□□ -0.32
SKA3-202ENST00000314759 PDE12Q6L8Q7 609 aaKnown RBP13.03□□□□□ -0.32
SKA3-202ENST00000314759 GPR153Q6NV75 609 aa13.03□□□□□ -0.32
SKA3-202ENST00000314759 METTL2BQ6P1Q9 378 aaKnown RBP13.03□□□□□ -0.32
SKA3-202ENST00000314759 TMC5Q6UXY8 1006 aa13.03□□□□□ -0.32
SKA3-202ENST00000314759 CBLL1Q75N03 491 aa13.03□□□□□ -0.32
SKA3-202ENST00000314759 ADGRG2Q8IZP9 1017 aa13.03□□□□□ -0.32
SKA3-202ENST00000314759 OR6F1Q8NGZ6 308 aa13.03□□□□□ -0.32
SKA3-202ENST00000314759 SNX6Q9UNH7 406 aa13.03□□□□□ -0.32
SKA3-202ENST00000314759 TNFRSF10AO00220 468 aa13.02□□□□□ -0.32
SKA3-202ENST00000314759 HAT1O14929 419 aa13.02□□□□□ -0.32
SKA3-202ENST00000314759 SLC19A1P41440 591 aa13.02□□□□□ -0.32
SKA3-202ENST00000314759 KIR3DL1P43629 444 aa13.02□□□□□ -0.32
SKA3-202ENST00000314759 ITGA1P56199 1179 aa13.02□□□□□ -0.32
SKA3-202ENST00000314759 ARPC4P59998 168 aa13.02□□□□□ -0.32
SKA3-202ENST00000314759 FAM189BP81408 668 aa13.02□□□□□ -0.32
SKA3-202ENST00000314759 E2F2Q14209 437 aa13.02□□□□□ -0.32
SKA3-202ENST00000314759 AGAP6Q5VW22 663 aa13.02□□□□□ -0.32
SKA3-202ENST00000314759 SLX4IPQ5VYV7 408 aa13.02□□□□□ -0.32
SKA3-202ENST00000314759 EIF3MQ7L2H7 374 aaKnown RBP13.02□□□□□ -0.32
SKA3-202ENST00000314759 P3H2Q8IVL5 708 aa13.02□□□□□ -0.32
SKA3-202ENST00000314759 FCGR1BQ92637 280 aa13.02□□□□□ -0.32
SKA3-202ENST00000314759 APOLD1Q96LR9 279 aa13.02□□□□□ -0.32
SKA3-202ENST00000314759 AGAP4Q96P64 663 aa13.02□□□□□ -0.32
SKA3-202ENST00000314759 PANX1Q96RD7 426 aa13.02□□□□□ -0.32
SKA3-202ENST00000314759 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.02□□□□□ -0.32
SKA3-202ENST00000314759 ELOVL6Q9H5J4 265 aa13.02□□□□□ -0.32
SKA3-202ENST00000314759 GKN1Q9NS71 199 aa13.02□□□□□ -0.32
SKA3-202ENST00000314759 PSORS1C1Q9UIG5 152 aa13.02□□□□□ -0.32
SKA3-202ENST00000314759 VPS4AQ9UN37 437 aa13.02□□□□□ -0.32
SKA3-202ENST00000314759 FCF1Q9Y324 198 aaKnown RBP13.02□□□□□ -0.32
SKA3-202ENST00000314759 A0A1B0GVM2 712 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 UPK3BL1B0FP48 263 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 UPK3BL2E5RIL1 263 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 SCAMP3O14828 347 aaKnown RBP13.02□□□□□ -0.33
SKA3-202ENST00000314759 GPX2P18283 190 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 ACRV1P26436 265 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 PNCKQ6P2M8 343 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 PIH1D2Q8WWB5 315 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 CLIP3Q96DZ5 547 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 C7orf34Q96L11 122 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 DMRTB1Q96MA1 342 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 KCNC2Q96PR1 638 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 NXF2Q9GZY0 626 aaKnown RBP13.02□□□□□ -0.33
SKA3-202ENST00000314759 SLC32A1Q9H598 525 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 C14orf119Q9NWQ9 140 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 KCNE1BA0A087WTH5 132 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 OR6C75A6NL08 312 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 FPGTO14772 594 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 C9P02748 559 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 ANXA5P08758 320 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 CHRNB1P11230 501 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 ATF6P18850 670 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 CORO1AP31146 461 aaKnown RBP13.02□□□□□ -0.33
SKA3-202ENST00000314759 CSNK2BP67870 215 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 ELP6Q0PNE2 266 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 GPR17Q13304 367 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 TBCEQ15813 527 aaPredicted RBP13.02□□□□□ -0.33
SKA3-202ENST00000314759 DUOXA1Q1HG43 343 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.02□□□□□ -0.33
SKA3-202ENST00000314759 ZNF621Q6ZSS3 439 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 OR7G1Q8NGA0 311 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 OR6K2Q8NGY2 324 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 NELL1Q92832 810 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 CMTM7Q96FZ5 175 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 TPD52L3Q96J77 140 aa13.02□□□□□ -0.33
SKA3-202ENST00000314759 ZFYVE1Q9HBF4 777 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms