RNA–Protein interactions for RNA: ENST00000313860.11

LIMCH1-201, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMCH1, Length 6,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-201ENST00000313860 F2RP25116 425 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 EIF1AXP47813 144 aaKnown RBP7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 ALDH5A1P51649 535 aaPredicted RBP7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 BEX3Q00994 111 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 CHRFAM7AQ494W8 412 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 SLC9B1Q4ZJI4 515 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 TMEM135Q86UB9 458 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 TRAM1L1Q8N609 369 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 ADCY4Q8NFM4 1077 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 LRRN4Q8WUT4 740 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 ACSF2Q96CM8 615 aaPredicted RBP7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 CCDC126Q96EE4 140 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 PCYT2Q99447 389 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 SEMA4CQ9C0C4 833 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 ZNF518BQ9C0D4 1074 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 ITM2CQ9NQX7 267 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 MAGI2Q86UL8 1455 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 TMEM235A6NFC5 223 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 GJE1A6NN92 205 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 RIIAD1A6NNX1 92 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 TLX3O43711 291 aaPredicted RBP7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 ANXA9O76027 345 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 RPP14O95059 124 aaKnown RBP7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 RECKO95980 971 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 BMP1P13497 986 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 AHCYP23526 432 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 AGTR1P30556 359 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 BLKP51451 505 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 RENBPP51606 427 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 HHEXQ03014 270 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 FCN2Q15485 313 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 EXOSC6Q5RKV6 272 aaKnown RBP7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 USP49Q70CQ1 688 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 PQLC1Q8N2U9 271 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 OR6N2Q8NGY6 317 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 ARL11Q969Q4 196 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 ZNF566Q969W8 418 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 OXNAD1Q96HP4 312 aaPredicted RBP7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 SLC6A16Q9GZN6 736 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 OR2D2Q9H210 308 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 CDT1Q9H211 546 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 DZANK1Q9NVP4 752 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 BCS1LQ9Y276 419 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 DISP3Q9P2K9 1392 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 MOXD2PA6NHM9 499 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 DHRS3O75911 302 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 FCARP24071 287 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 GABRA2P47869 451 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 RBM6P78332 1123 aaKnown RBP7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 PROSER3Q2NL68 480 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 OR8K5Q8NH50 307 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 NANPQ8TBE9 248 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 SMPDL3AQ92484 453 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 SGTBQ96EQ0 304 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 CELF4Q9BZC1 486 aaKnown RBP7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 LRRN3Q9H3W5 708 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 RXFP3Q9NSD7 469 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 MYEF2Q9P2K5 600 aaKnown RBP7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 RHCGQ9UBD6 479 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 CORO1CQ9ULV4 474 aaPredicted RBP7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 PCDHB1Q9Y5F3 818 aa7.46□□□□□ -1.22
LIMCH1-201ENST00000313860 NESP48681 1621 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 E7EWF7 191 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 M0R2N6 131 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 GOSR2O14653 212 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 OR2T1O43869 369 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 COQ9O75208 318 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 ENTPD6O75354 484 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 CHRNA1P02708 482 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 C2P06681 752 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 PEPDP12955 493 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 EDNRAP25101 427 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 IL12BP29460 328 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 BOP1Q14137 746 aaKnown RBP7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 HNF4GQ14541 408 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 CES5AQ6NT32 575 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 PTF1AQ7RTS3 328 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 SLC29A1Q99808 456 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 ISCA1Q9BUE6 129 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 CARS2Q9HA77 564 aaKnown RBP7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 DUS2Q9NX74 493 aaKnown RBP7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 EPHA6Q9UF33 1036 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 FEM1BQ9UK73 627 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 NIP7Q9Y221 180 aaKnown RBP eCLIP7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 TEX33O43247 280 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 SIAH2O43255 324 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 DCXO43602 365 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 TGDSO95455 350 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 GGPS1O95749 300 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 GOT2P00505 430 aaKnown RBP7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 ARP10275 920 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 ITGB5P18084 799 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 GAS6Q14393 721 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 FFAR4Q5NUL3 377 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 TAPT1Q6NXT6 567 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 ZSWIM9Q86XI8 627 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 OR4A15Q8NGL6 344 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 PSMF1Q92530 271 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 KIRREL1Q96J84 757 aa7.45□□□□□ -1.22
LIMCH1-201ENST00000313860 METTL22Q9BUU2 404 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms