RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 CLEC4DQ8WXI8 215 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 AGPAT4Q9NRZ5 378 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 CLIC1O00299 241 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 TREHO43280 583 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 GMFGO60234 142 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 APBB3O95704 486 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 SSTR3P32745 418 aaPredicted RBP8.59□□□□□ -1.03
COL6A5-202ENST00000312481 SSR2P43308 183 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 GPR1P46091 355 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 RPA4Q13156 261 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 TRAM2Q15035 370 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 KIAA1211LQ6NV74 962 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 JAZF1Q86VZ6 243 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 CPA6Q8N4T0 437 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 SNX18Q96RF0 628 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 GSDMCQ9BYG8 508 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 ZFP14Q9HCL3 533 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 CDHR4A6H8M9 788 aa8.59□□□□□ -1.04
COL6A5-202ENST00000312481 PDHXO00330 501 aa8.59□□□□□ -1.04
COL6A5-202ENST00000312481 EI24O14681 340 aa8.59□□□□□ -1.04
COL6A5-202ENST00000312481 CYB5AP00167 134 aa8.59□□□□□ -1.04
COL6A5-202ENST00000312481 DRD2P14416 443 aa8.59□□□□□ -1.04
COL6A5-202ENST00000312481 CDKL1Q00532 357 aa8.59□□□□□ -1.04
COL6A5-202ENST00000312481 CTBP1Q13363 440 aa8.59□□□□□ -1.04
COL6A5-202ENST00000312481 C11orf91Q3C1V1 193 aa8.59□□□□□ -1.04
COL6A5-202ENST00000312481 TFAP2DQ7Z6R9 452 aa8.59□□□□□ -1.04
COL6A5-202ENST00000312481 TSPAN33Q86UF1 283 aa8.59□□□□□ -1.04
COL6A5-202ENST00000312481 SPPL2CQ8IUH8 684 aa8.59□□□□□ -1.04
COL6A5-202ENST00000312481 ADAMTS16Q8TE57 1224 aa8.59□□□□□ -1.04
COL6A5-202ENST00000312481 CHPT1Q8WUD6 406 aa8.59□□□□□ -1.04
COL6A5-202ENST00000312481 GATA6Q92908 595 aa8.59□□□□□ -1.04
COL6A5-202ENST00000312481 KLRG1Q96E93 195 aa8.59□□□□□ -1.04
COL6A5-202ENST00000312481 CD180Q99467 661 aa8.59□□□□□ -1.04
COL6A5-202ENST00000312481 RAB9BQ9NP90 201 aa8.59□□□□□ -1.04
COL6A5-202ENST00000312481 PLOD3O60568 738 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 ATP6V1G1O75348 118 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 CREG1O75629 220 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 TACR2P21452 398 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 UQCRC2P22695 453 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 TAS2R39P59534 338 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 PRKCDQ05655 676 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 UBQLNLQ8IYU4 475 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 DCAF4L2Q8NA75 395 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 ADAM7Q9H2U9 754 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 MARCH7Q9H992 704 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 KANTRA0A1W2PQU2 76 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 LRRN3E7EW58 273 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 F5H423 210 aaPredicted RBP8.58□□□□□ -1.04
COL6A5-202ENST00000312481 ARNTLO00327 626 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 FBP2O00757 339 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 OR10H2O60403 315 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 SLC25A14O95258 325 aaPredicted RBP8.58□□□□□ -1.04
COL6A5-202ENST00000312481 GKP32189 559 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 OGDHQ02218 1023 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 HSPA14Q0VDF9 509 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 DAW1Q8N136 415 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 TESCQ96BS2 214 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 IMP4Q96G21 291 aaKnown RBP8.58□□□□□ -1.04
COL6A5-202ENST00000312481 SEMA4CQ9C0C4 833 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 LRRN3Q9H3W5 708 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 UBQLN2Q9UHD9 624 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 CACNA1IQ9P0X4 2223 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 GKN3PP0CG01 181 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 FAM174AQ8TBP5 190 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 AKTIPQ9H8T0 292 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 MAT2BQ9NZL9 334 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 MOSPD1Q9UJG1 213 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 CD97P48960 835 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 ZNF157P51786 506 aaPredicted RBP8.58□□□□□ -1.04
COL6A5-202ENST00000312481 CERCAMQ5T4B2 595 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 NCCRP1Q6ZVX7 275 aaPredicted RBP8.58□□□□□ -1.04
COL6A5-202ENST00000312481 ASCC1Q8N9N2 400 aaKnown RBP8.58□□□□□ -1.04
COL6A5-202ENST00000312481 CELF6Q96J87 481 aaKnown RBP8.58□□□□□ -1.04
COL6A5-202ENST00000312481 MCUBQ9NWR8 336 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 PSMD8P48556 350 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 PFKPQ01813 784 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 LY6KQ17RY6 165 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 MYLK3Q32MK0 819 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 CMC1Q7Z7K0 106 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 UBE2J2Q8N2K1 259 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 CBARPQ8N350 705 aaPredicted RBP8.58□□□□□ -1.04
COL6A5-202ENST00000312481 PNPLA2Q96AD5 504 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 BMFQ96LC9 184 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 ZNF222Q9UK12 451 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 CLDN24A6NM45 220 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 ANKRD66B4E2M5 251 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 LCN1P31025 176 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 CAMK2DQ13557 499 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 MFSD13AQ14CX5 517 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 GPR158Q5T848 1215 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 GK5Q6ZS86 529 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 C11orf74Q86VG3 221 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 SUN3Q8TAQ9 357 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 ISL2Q96A47 359 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 MALT1Q9UDY8 824 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 WASH4PA8MWX3 477 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 TMEM63AO94886 807 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 PIM1P11309 404 aaPredicted RBP8.58□□□□□ -1.04
COL6A5-202ENST00000312481 HDCP19113 662 aa8.58□□□□□ -1.04
COL6A5-202ENST00000312481 HTR2AP28223 471 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms