RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 ADARP55265 1226 aaKnown RBP8.01□□□□□ -1.13
CHD6-201ENST00000309279 TRIM25Q14258 630 aaKnown RBP8.01□□□□□ -1.13
CHD6-201ENST00000309279 ZNF124Q15973 351 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 PFKFB4Q16877 469 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 BCL7AQ4VC05 210 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 MRNIPQ6NTE8 343 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 TMEM220Q6QAJ8 160 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 ALYREFQ86V81 257 aaKnown RBP8.01□□□□□ -1.13
CHD6-201ENST00000309279 NRROSQ86YC3 692 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 CNTN4Q8IWV2 1026 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 DPP10Q8N608 796 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 PNPLA1Q8N8W4 532 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 CALML6Q8TD86 181 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 IFT81Q8WYA0 676 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 SLC47A1Q96FL8 570 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 DCUN1D1Q96GG9 259 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 LINC00615Q96LM1 132 aaPredicted RBP8.01□□□□□ -1.13
CHD6-201ENST00000309279 OR2M4Q96R27 311 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 BOCQ9BWV1 1114 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 TRIM2Q9C040 744 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 SAYSD1Q9NPB0 183 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 TLK1Q9UKI8 766 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 GPSM3Q9Y4H4 160 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 SPTBN4Q9H254 2564 aa8.01□□□□□ -1.13
CHD6-201ENST00000309279 COL5A1P20908 1838 aaPredicted RBP8.01□□□□□ -1.13
CHD6-201ENST00000309279 EME2A4GXA9 379 aaPredicted RBP8□□□□□ -1.13
CHD6-201ENST00000309279 RHPN2P1A8MT19 583 aa8□□□□□ -1.13
CHD6-201ENST00000309279 ZNF891A8MT65 544 aaPredicted RBP8□□□□□ -1.13
CHD6-201ENST00000309279 GOLGA8KD6RF30 607 aa8□□□□□ -1.13
CHD6-201ENST00000309279 GOLGA8TH3BQL2 631 aa8□□□□□ -1.13
CHD6-201ENST00000309279 ATXN7O15265 892 aaPredicted RBP8□□□□□ -1.13
CHD6-201ENST00000309279 YY2O15391 372 aa8□□□□□ -1.13
CHD6-201ENST00000309279 FLRT2O43155 660 aa8□□□□□ -1.13
CHD6-201ENST00000309279 OR1I1O60431 355 aa8□□□□□ -1.13
CHD6-201ENST00000309279 AP2A2O94973 939 aa8□□□□□ -1.13
CHD6-201ENST00000309279 KLHL2O95198 593 aa8□□□□□ -1.13
CHD6-201ENST00000309279 S1PR4O95977 384 aa8□□□□□ -1.13
CHD6-201ENST00000309279 CELA2BP08218 269 aaPredicted RBP8□□□□□ -1.13
CHD6-201ENST00000309279 GSTA2P09210 222 aa8□□□□□ -1.13
CHD6-201ENST00000309279 PRKAR1AP10644 381 aa8□□□□□ -1.13
CHD6-201ENST00000309279 ANXA8P13928 327 aa8□□□□□ -1.13
CHD6-201ENST00000309279 ZNF7P17097 686 aaPredicted RBP8□□□□□ -1.13
CHD6-201ENST00000309279 GALP22466 123 aa8□□□□□ -1.13
CHD6-201ENST00000309279 RPS3P23396 243 aaKnown RBP eCLIP8□□□□□ -1.13
CHD6-201ENST00000309279 TNFRSF8P28908 595 aa8□□□□□ -1.13
CHD6-201ENST00000309279 TAGLN2P37802 199 aaKnown RBP8□□□□□ -1.13
CHD6-201ENST00000309279 MAGEA4P43358 317 aa8□□□□□ -1.13
CHD6-201ENST00000309279 PRLHRP49683 370 aa8□□□□□ -1.13
CHD6-201ENST00000309279 ZNF41P51814 821 aaPredicted RBP8□□□□□ -1.13
CHD6-201ENST00000309279 GMFBP60983 142 aa8□□□□□ -1.13
CHD6-201ENST00000309279 TRA2BP62995 288 aaKnown RBP8□□□□□ -1.13
CHD6-201ENST00000309279 IL9RQ01113 521 aa8□□□□□ -1.13
CHD6-201ENST00000309279 CTBSQ01459 385 aa8□□□□□ -1.13
CHD6-201ENST00000309279 ILF3Q12906 894 aaKnown RBP eCLIP8□□□□□ -1.137e-7■■■■□ 24
CHD6-201ENST00000309279 THOC5Q13769 683 aaKnown RBP8□□□□□ -1.13
CHD6-201ENST00000309279 SNCBQ16143 134 aa8□□□□□ -1.13
CHD6-201ENST00000309279 HSP90AA5PQ58FG0 334 aa8□□□□□ -1.13
CHD6-201ENST00000309279 TEX35Q5T0J7 233 aa8□□□□□ -1.13
CHD6-201ENST00000309279 ANXA8L1Q5VT79 327 aa8□□□□□ -1.13
CHD6-201ENST00000309279 SHEQ5VZ18 495 aa8□□□□□ -1.13
CHD6-201ENST00000309279 DESI1Q6ICB0 168 aa8□□□□□ -1.13
CHD6-201ENST00000309279 TMEM53Q6P2H8 277 aa8□□□□□ -1.13
CHD6-201ENST00000309279 ZNF704Q6ZNC4 412 aaPredicted RBP8□□□□□ -1.13
CHD6-201ENST00000309279 PIP4P1Q86T03 277 aa8□□□□□ -1.13
CHD6-201ENST00000309279 LDB1Q86U70 411 aaPredicted RBP8□□□□□ -1.13
CHD6-201ENST00000309279 TSPYL5Q86VY4 417 aaPredicted RBP8□□□□□ -1.13
CHD6-201ENST00000309279 KCNMB4Q86W47 210 aa8□□□□□ -1.13
CHD6-201ENST00000309279 GKN2Q86XP6 184 aa8□□□□□ -1.13
CHD6-201ENST00000309279 GATAD2AQ86YP4 633 aa8□□□□□ -1.13
CHD6-201ENST00000309279 UNC5BQ8IZJ1 945 aa8□□□□□ -1.13
CHD6-201ENST00000309279 CLDN19Q8N6F1 224 aa8□□□□□ -1.13
CHD6-201ENST00000309279 OR4C6Q8NH72 309 aa8□□□□□ -1.13
CHD6-201ENST00000309279 CCL4L1Q8NHW4 92 aa8□□□□□ -1.13
CHD6-201ENST00000309279 ZNF671Q8TAW3 534 aa8□□□□□ -1.13
CHD6-201ENST00000309279 LMX1AQ8TE12 382 aa8□□□□□ -1.13
CHD6-201ENST00000309279 CERS2Q96G23 380 aa8□□□□□ -1.13
CHD6-201ENST00000309279 FMO2Q99518 471 aa8□□□□□ -1.13
CHD6-201ENST00000309279 TIMM29Q9BSF4 260 aa8□□□□□ -1.13
CHD6-201ENST00000309279 DUSP23Q9BVJ7 150 aa8□□□□□ -1.13
CHD6-201ENST00000309279 GSDMCQ9BYG8 508 aa8□□□□□ -1.13
CHD6-201ENST00000309279 ADAM19Q9H013 955 aa8□□□□□ -1.13
CHD6-201ENST00000309279 P2RY12Q9H244 342 aa8□□□□□ -1.13
CHD6-201ENST00000309279 ANKZF1Q9H8Y5 726 aa8□□□□□ -1.13
CHD6-201ENST00000309279 LRRC4CQ9HCJ2 640 aa8□□□□□ -1.13
CHD6-201ENST00000309279 SLC35D1Q9NTN3 355 aa8□□□□□ -1.13
CHD6-201ENST00000309279 C20orf96Q9NUD7 363 aaPredicted RBP8□□□□□ -1.13
CHD6-201ENST00000309279 C14orf119Q9NWQ9 140 aa8□□□□□ -1.13
CHD6-201ENST00000309279 NLGN3Q9NZ94 848 aa8□□□□□ -1.13
CHD6-201ENST00000309279 OR6C2Q9NZP2 312 aa8□□□□□ -1.13
CHD6-201ENST00000309279 GULP1Q9UBP9 304 aa8□□□□□ -1.13
CHD6-201ENST00000309279 SLC23A2Q9UGH3 650 aa8□□□□□ -1.13
CHD6-201ENST00000309279 VPS9D1Q9Y2B5 631 aa8□□□□□ -1.13
CHD6-201ENST00000309279 MGAT4DA6NG13 374 aa8□□□□□ -1.13
CHD6-201ENST00000309279 OR2AG2A6NM03 316 aa8□□□□□ -1.13
CHD6-201ENST00000309279 OR5K4A6NMS3 321 aa8□□□□□ -1.13
CHD6-201ENST00000309279 QSOX1O00391 747 aa8□□□□□ -1.13
CHD6-201ENST00000309279 PRMT5O14744 637 aaPredicted RBP8□□□□□ -1.13
CHD6-201ENST00000309279 SLC30A4O14863 429 aa8□□□□□ -1.13
CHD6-201ENST00000309279 PFDN6O15212 129 aa8□□□□□ -1.13
CHD6-201ENST00000309279 CBFA2T3O75081 653 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms