RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 PCTPQ9UKL6 214 aa11.81□□□□□ -0.52
PDGFD-201ENST00000302251 PCDHB1Q9Y5F3 818 aa11.81□□□□□ -0.52
PDGFD-201ENST00000302251 PCDHGB6Q9Y5F9 930 aa11.81□□□□□ -0.52
PDGFD-201ENST00000302251 NINQ8N4C6 2090 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 ISPDA4D126 451 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 SLC28A2O43868 658 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 UPK1BO75841 260 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 RPL17P18621 184 aaKnown RBP11.8□□□□□ -0.52
PDGFD-201ENST00000302251 FDXRP22570 491 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 SSTR4P31391 388 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 HTR2BP41595 481 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 MANFP55145 182 aaKnown RBP11.8□□□□□ -0.52
PDGFD-201ENST00000302251 ZNF45Q02386 682 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 TARDBPQ13148 414 aaKnown RBP eCLIP11.8□□□□□ -0.52
PDGFD-201ENST00000302251 SOWAHCQ53LP3 525 aaPredicted RBP11.8□□□□□ -0.52
PDGFD-201ENST00000302251 SPRED1Q7Z699 444 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 ALDH16A1Q8IZ83 802 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 RHEBL1Q8TAI7 183 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 FRMD6Q96NE9 622 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 RDH12Q96NR8 316 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 GPR78Q96P69 363 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 C16orf70Q9BSU1 422 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 C2orf49Q9BVC5 232 aaPredicted RBP11.8□□□□□ -0.52
PDGFD-201ENST00000302251 OSBPL10Q9BXB5 764 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 GPN2Q9H9Y4 310 aaPredicted RBP11.8□□□□□ -0.52
PDGFD-201ENST00000302251 UTS2RQ9UKP6 389 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 RIMKLBQ9ULI2 386 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 PPP2R3BQ9Y5P8 575 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 PHIPQ8WWQ0 1821 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 FAM47E-STBD1D6RA91 191 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 MANBAO00462 879 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 SLITRK5O94991 958 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 FGF4P08620 206 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 SLC2A2P11168 524 aaPredicted RBP11.8□□□□□ -0.52
PDGFD-201ENST00000302251 PTNP21246 168 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 ACOX1Q15067 660 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 PTCHD3Q3KNS1 767 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 INAVAQ3KP66 663 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 LIPKQ5VXJ0 399 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 MMAAQ8IVH4 418 aaKnown RBP11.8□□□□□ -0.52
PDGFD-201ENST00000302251 GPC2Q8N158 579 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 CYP4Z2PQ8N1L4 340 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 CADM2Q8N3J6 435 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 CELF2-AS1Q8N7Q2 184 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 RHOXF1Q8NHV9 184 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 SLC2A11Q9BYW1 496 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 TRIT1Q9H3H1 467 aaKnown RBP11.8□□□□□ -0.52
PDGFD-201ENST00000302251 TUBB1Q9H4B7 451 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 TM9SF3Q9HD45 589 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 SEMA3GQ9NS98 782 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 MCUBQ9NWR8 336 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 SEC14L3Q9UDX4 400 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 PCDHA9Q9Y5H5 950 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 BRCA1P38398 1863 aaKnown RBP11.8□□□□□ -0.52
PDGFD-201ENST00000302251 COL1A2P08123 1366 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 HAS3O00219 553 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 NUAK1O60285 661 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 IGSF6O95976 241 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 CREMQ03060 361 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 ZNF267Q14586 743 aaPredicted RBP11.8□□□□□ -0.52
PDGFD-201ENST00000302251 SF1Q15637 639 aaKnown RBP11.8□□□□□ -0.52
PDGFD-201ENST00000302251 CLEC12AQ5QGZ9 265 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 STEAP3Q658P3 488 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 FAM180BQ6P0A1 224 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 CERS6Q6ZMG9 384 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 HMGN2P46Q86SG4 172 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 ZMIZ2Q8NF64 920 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 AP3S1Q92572 193 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 PIGKQ92643 395 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 MAELQ96JY0 434 aaKnown RBP11.8□□□□□ -0.52
PDGFD-201ENST00000302251 CAMKK2Q96RR4 588 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 MROQ9BYG7 248 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 CHIAQ9BZP6 476 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 POLR2J3Q9H1A7 115 aaKnown RBP11.8□□□□□ -0.52
PDGFD-201ENST00000302251 IL1RAPQ9NPH3 570 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 MAPRE3Q9UPY8 281 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 SESN1Q9Y6P5 492 aa11.8□□□□□ -0.52
PDGFD-201ENST00000302251 DOCK5Q9H7D0 1870 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 C12orf71A8MTZ7 269 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 GUCY1B2O75343 617 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 PAPSS2O95340 614 aaPredicted RBP11.79□□□□□ -0.52
PDGFD-201ENST00000302251 DDX5P17844 614 aaKnown RBP11.79□□□□□ -0.52
PDGFD-201ENST00000302251 CSTF2P33240 577 aaKnown RBP eCLIP11.79□□□□□ -0.52
PDGFD-201ENST00000302251 ATP13A5Q4VNC0 1218 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.79□□□□□ -0.52
PDGFD-201ENST00000302251 DCST1Q5T197 706 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 C10orf62Q5T681 223 aaPredicted RBP11.79□□□□□ -0.52
PDGFD-201ENST00000302251 BHLHB9Q6PI77 547 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 TMEM207Q6UWW9 146 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 PIANPQ8IYJ0 282 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 AQP11Q8NBQ7 271 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 OR8J3Q8NGG0 315 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 ARMC5Q96C12 935 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 EGLN2Q96KS0 407 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 BBS4Q96RK4 519 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 ZNF382Q96SR6 550 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 CPNE5Q9HCH3 593 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 GTF2A1LQ9UNN4 478 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 CACNA1CQ13936 2221 aa11.79□□□□□ -0.52
PDGFD-201ENST00000302251 BRCA2P51587 3418 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms