RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 CCDC81Q6ZN84 652 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 DCP2Q8IU60 420 aaKnown RBP13.17□□□□□ -0.3
CDH8-201ENST00000299345 OR52E4Q8NGH9 312 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 REPS1Q96D71 796 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 APOL4Q9BPW4 351 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 DPH2Q9BQC3 489 aaPredicted RBP13.17□□□□□ -0.3
CDH8-201ENST00000299345 GALNT8Q9NY28 637 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 USE1Q9NZ43 259 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 KCNE1BA0A087WTH5 132 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 NRG2O14511 850 aaPredicted RBP13.17□□□□□ -0.3
CDH8-201ENST00000299345 UGDHO60701 494 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 ANGPTL1O95841 491 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 PIGAP37287 484 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 DGKGP49619 791 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 ANXA8L1Q5VT79 327 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 PDE12Q6L8Q7 609 aaKnown RBP13.17□□□□□ -0.3
CDH8-201ENST00000299345 MED27Q6P2C8 311 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 ADIPOR2Q86V24 386 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 DDHD1Q8NEL9 900 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 AMBRA1Q9C0C7 1298 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 DYRK4Q9NR20 520 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 MAPRE3Q9UPY8 281 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 TPRKBQ9Y3C4 175 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 NUP214P35658 2090 aaPredicted RBP13.17□□□□□ -0.3
CDH8-201ENST00000299345 TRBV5-3A0A0A0MS03 114 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 CXorf51AA0A1B0GTR3 108 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 HIDE1A8MVS5 230 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 UGT2B11O75310 529 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 POLR2IP36954 125 aaKnown RBP13.17□□□□□ -0.3
CDH8-201ENST00000299345 CRATP43155 626 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 PRIM2P49643 509 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 FOXD4Q12950 439 aaPredicted RBP13.17□□□□□ -0.3
CDH8-201ENST00000299345 BNIP3Q12983 259 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 ZXDCQ2QGD7 858 aaPredicted RBP13.17□□□□□ -0.3
CDH8-201ENST00000299345 RAET1GQ6H3X3 334 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 SERPINA11Q86U17 422 aa13.17□□□□□ -0.3
CDH8-201ENST00000299345 SLCO2B1O94956 709 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 DCKP27707 260 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 GPR1P46091 355 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 HTRA3P83110 453 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 UGT8Q16880 541 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 VTCN1Q7Z7D3 282 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 CALHM3Q86XJ0 350 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 C10orf111Q8N326 155 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 LILRA3Q8N6C8 439 aaPredicted RBP13.16□□□□□ -0.3
CDH8-201ENST00000299345 RASGEF1AQ8N9B8 481 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 CHDHQ8NE62 594 aaPredicted RBP13.16□□□□□ -0.3
CDH8-201ENST00000299345 RAB2BQ8WUD1 216 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 GLMNQ92990 594 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 PREBQ9HCU5 417 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 TM9SF3Q9HD45 589 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 KRT84Q9NSB2 600 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 RHBDL2Q9NX52 303 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 FZD4Q9ULV1 537 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 VPS4AQ9UN37 437 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 ITM2BQ9Y287 266 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 MRPS23Q9Y3D9 190 aaKnown RBP13.16□□□□□ -0.3
CDH8-201ENST00000299345 NEUROG3Q9Y4Z2 214 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 FADS2P1A8MWK0 482 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 SUV39H1O43463 412 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 PRAMEF4O60810 478 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 MITFO75030 526 aaPredicted RBP13.16□□□□□ -0.3
CDH8-201ENST00000299345 TIMP1P01033 207 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 ZNF182P17025 639 aaPredicted RBP13.16□□□□□ -0.3
CDH8-201ENST00000299345 NR4A1P22736 598 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 PPIBP23284 216 aaKnown RBP13.16□□□□□ -0.3
CDH8-201ENST00000299345 MAPK9P45984 424 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 ERVFC1P60507 584 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 CCSMST1Q4G0I0 132 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 PAGE2BQ5JRK9 111 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 PRAMEF9Q5VWM5 478 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 XKR5Q6UX68 686 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 TRIM74Q86UV6 250 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 RORBQ92753 470 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 PAWRQ96IZ0 340 aaKnown RBP13.16□□□□□ -0.3
CDH8-201ENST00000299345 HSH2DQ96JZ2 352 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 WASH3PC4AMC7 463 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 AGXTP21549 392 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 PRPH2P23942 346 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 DNAJA1P31689 397 aaKnown RBP13.16□□□□□ -0.3
CDH8-201ENST00000299345 DCDC1P59894 354 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 ZNF33BQ06732 778 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 TUBA3CQ13748 450 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 PIK3C3Q8NEB9 887 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 OR4A15Q8NGL6 344 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 RC3H2Q9HBD1 1191 aaKnown RBP13.16□□□□□ -0.3
CDH8-201ENST00000299345 CORO2BQ9UQ03 480 aa13.16□□□□□ -0.3
CDH8-201ENST00000299345 PCDH7O60245 1069 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 TMBIM6P55061 237 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 C21orf59P57076 290 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 RPS13P62277 151 aaKnown RBP13.15□□□□□ -0.3
CDH8-201ENST00000299345 OCA2Q04671 838 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 GRIN2CQ14957 1233 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 FNDC3BQ53EP0 1204 aaKnown RBP13.15□□□□□ -0.3
CDH8-201ENST00000299345 GRHL2Q6ISB3 625 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 GRASPQ7Z6J2 395 aaPredicted RBP13.15□□□□□ -0.3
CDH8-201ENST00000299345 TMEM179BQ7Z7N9 219 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 SPARTQ8N0X7 666 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 OR7G3Q8NG95 312 aa13.15□□□□□ -0.3
CDH8-201ENST00000299345 HUS1BQ8NHY5 278 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms