RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 CDC6Q99741 560 aa5.43□□□□□ -1.54
CPSF2-201ENST00000298875 TRMT61BQ9BVS5 477 aaKnown RBP5.43□□□□□ -1.54
CPSF2-201ENST00000298875 MMP27Q9H306 513 aa5.43□□□□□ -1.54
CPSF2-201ENST00000298875 FCF1Q9Y324 198 aaKnown RBP5.43□□□□□ -1.54
CPSF2-201ENST00000298875 REXO2Q9Y3B8 237 aaKnown RBP5.43□□□□□ -1.54
CPSF2-201ENST00000298875 PCDHGB7Q9Y5F8 929 aa5.43□□□□□ -1.54
CPSF2-201ENST00000298875 BORCS7-ASMTA0A0B4J1R7 106 aa5.43□□□□□ -1.54
CPSF2-201ENST00000298875 A0A1W2PQ67 120 aa5.43□□□□□ -1.54
CPSF2-201ENST00000298875 GPR89AB7ZAQ6 455 aa5.43□□□□□ -1.54
CPSF2-201ENST00000298875 OIP5O43482 229 aa5.43□□□□□ -1.54
CPSF2-201ENST00000298875 CILPO75339 1184 aa5.43□□□□□ -1.54
CPSF2-201ENST00000298875 KAT7O95251 611 aa5.43□□□□□ -1.54
CPSF2-201ENST00000298875 PLGP00747 810 aaPredicted RBP5.43□□□□□ -1.54
CPSF2-201ENST00000298875 CYP11A1P05108 521 aa5.43□□□□□ -1.54
CPSF2-201ENST00000298875 SBK2P0C263 348 aa5.43□□□□□ -1.54
CPSF2-201ENST00000298875 GPR89BP0CG08 455 aa5.43□□□□□ -1.54
CPSF2-201ENST00000298875 CDH1P12830 882 aa5.43□□□□□ -1.54
CPSF2-201ENST00000298875 ZNF16P17020 682 aaPredicted RBP5.43□□□□□ -1.54
CPSF2-201ENST00000298875 NOMO1Q15155 1222 aa5.43□□□□□ -1.54
CPSF2-201ENST00000298875 ZACNQ401N2 412 aa5.43□□□□□ -1.54
CPSF2-201ENST00000298875 CEP97Q8IW35 865 aa5.43□□□□□ -1.54
CPSF2-201ENST00000298875 PCDHB18PQ96TA0 734 aa5.43□□□□□ -1.54
CPSF2-201ENST00000298875 POLR2J2Q9GZM3 115 aaKnown RBP5.43□□□□□ -1.54
CPSF2-201ENST00000298875 PPP4R1LQ9P1A2 415 aa5.43□□□□□ -1.54
CPSF2-201ENST00000298875 COL1A1P02452 1464 aaPredicted RBP5.43□□□□□ -1.54
CPSF2-201ENST00000298875 RHPN2P1A8MT19 583 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 IFNA17P01571 189 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 C8GP07360 202 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 RPS17P08708 135 aaKnown RBP5.42□□□□□ -1.54
CPSF2-201ENST00000298875 DNAJB1P25685 340 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 MAPK3P27361 379 aaPredicted RBP5.42□□□□□ -1.54
CPSF2-201ENST00000298875 PRKAR1BP31321 381 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 GK3PQ14409 553 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 TRAM1Q15629 374 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 ZNF565Q8N9K5 539 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 CCDC32Q9BV29 185 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 ITPAQ9BY32 194 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 AGXT2Q9BYV1 514 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 ABCD2Q9UBJ2 740 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 SLC45A1Q9Y2W3 748 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 ZNF536O15090 1300 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 KLRC4O43908 158 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 F7P08709 466 aaPredicted RBP5.42□□□□□ -1.54
CPSF2-201ENST00000298875 CTSOP43234 321 aaPredicted RBP5.42□□□□□ -1.54
CPSF2-201ENST00000298875 JAM2P57087 298 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 HERVK_113P63132 956 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 ASTE1Q2TB18 679 aaPredicted RBP5.42□□□□□ -1.54
CPSF2-201ENST00000298875 ALG10Q5BKT4 473 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 TMPRSS9Q7Z410 1059 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 PPTC7Q8NI37 304 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 ERVK-6Q9BXR3 956 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 PCBD2Q9H0N5 130 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 NPAP1Q9NZP6 1156 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 GSKIPQ9P0R6 139 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 SIRPGQ9P1W8 387 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 LOC100130705A0A1B0GUX0 176 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 C2orf92A0A1B0GVN3 265 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 WASHC1A8K0Z3 465 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 WASH3PC4AMC7 463 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 SCAMP1O15126 338 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 CXCL14O95715 111 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 EIF1AXP47813 144 aaKnown RBP5.42□□□□□ -1.54
CPSF2-201ENST00000298875 WASH2PQ6VEQ5 465 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 SLC22A16Q86VW1 577 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 PAQR7Q86WK9 346 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 GALNT11Q8NCW6 608 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 DCAKDQ8WVC6 231 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 ADAD1Q96M93 576 aaKnown RBP5.42□□□□□ -1.54
CPSF2-201ENST00000298875 FOLH1BQ9HBA9 442 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 RDH8Q9NYR8 311 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 MYOM1P52179 1685 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 SMIM30A4D0T7 59 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 DISC1C4P0D8 188 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 SLC19A2O60779 497 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 RDH16O75452 317 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 DDNO94850 711 aaPredicted RBP5.42□□□□□ -1.54
CPSF2-201ENST00000298875 CYP17A1P05093 508 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 S100A8P05109 93 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 HCKP08631 526 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 LCN1P31025 176 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 PCBP2Q15366 365 aaKnown RBP eCLIP5.42□□□□□ -1.54
CPSF2-201ENST00000298875 BTBD16Q32M84 506 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 SH3D19Q5HYK7 790 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 BEND4Q6ZU67 534 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 OR8S1Q8NH09 359 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 OVCA2Q8WZ82 227 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 ZBED6CLQ96FA7 236 aaPredicted RBP5.42□□□□□ -1.54
CPSF2-201ENST00000298875 CDK15Q96Q40 435 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 TSNAXQ99598 290 aaKnown RBP5.42□□□□□ -1.54
CPSF2-201ENST00000298875 B3GAT2Q9NPZ5 323 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 DUS2Q9NX74 493 aaKnown RBP5.42□□□□□ -1.54
CPSF2-201ENST00000298875 NOP16Q9Y3C1 178 aaKnown RBP5.42□□□□□ -1.54
CPSF2-201ENST00000298875 ROBO1Q9Y6N7 1651 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 A0A1B0GVT2 93 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 EIF1AYO14602 144 aaKnown RBP5.42□□□□□ -1.54
CPSF2-201ENST00000298875 NDUFS4O43181 175 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 ENTPD6O75354 484 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 TACR2P21452 398 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 RABGGTBP53611 331 aa5.42□□□□□ -1.54
CPSF2-201ENST00000298875 CCL23P55773 120 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 218.6 ms