RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 B4GAT1O43505 415 aa17.12■□□□□ 0.33
CCDC78-201ENST00000293889 SNUPNO95149 360 aaKnown RBP17.12■□□□□ 0.33
CCDC78-201ENST00000293889 ESRRBO95718 433 aa17.12■□□□□ 0.33
CCDC78-201ENST00000293889 PNLIPP16233 465 aa17.12■□□□□ 0.33
CCDC78-201ENST00000293889 UGT2B7P16662 529 aa17.12■□□□□ 0.33
CCDC78-201ENST00000293889 GNAZP19086 355 aa17.12■□□□□ 0.33
CCDC78-201ENST00000293889 ARL1P40616 181 aaPredicted RBP17.12■□□□□ 0.33
CCDC78-201ENST00000293889 PKNOX1P55347 436 aa17.12■□□□□ 0.33
CCDC78-201ENST00000293889 PRDX1Q06830 199 aaKnown RBP17.12■□□□□ 0.33
CCDC78-201ENST00000293889 PCDH1Q08174 1060 aa17.12■□□□□ 0.33
CCDC78-201ENST00000293889 PRKAA1Q13131 559 aa17.12■□□□□ 0.33
CCDC78-201ENST00000293889 CHIT1Q13231 466 aa17.12■□□□□ 0.33
CCDC78-201ENST00000293889 SF1Q15637 639 aaKnown RBP17.12■□□□□ 0.33
CCDC78-201ENST00000293889 PERM1Q5SV97 790 aa17.12■□□□□ 0.33
CCDC78-201ENST00000293889 NKAIN2Q5VXU1 208 aa17.12■□□□□ 0.33
CCDC78-201ENST00000293889 FAM219BQ5XKK7 198 aa17.12■□□□□ 0.33
CCDC78-201ENST00000293889 LETMD1Q6P1Q0 360 aa17.12■□□□□ 0.33
CCDC78-201ENST00000293889 KLHL35Q6PF15 583 aa17.12■□□□□ 0.33
CCDC78-201ENST00000293889 SLCO4C1Q6ZQN7 724 aa17.12■□□□□ 0.33
CCDC78-201ENST00000293889 MILR1Q7Z6M3 343 aa17.12■□□□□ 0.33
CCDC78-201ENST00000293889 C17orf64Q86WR6 236 aa17.12■□□□□ 0.33
CCDC78-201ENST00000293889 ZNF781Q8N8C0 355 aa17.12■□□□□ 0.33
CCDC78-201ENST00000293889 ENDOVQ8N8Q3 282 aaKnown RBP17.12■□□□□ 0.33
CCDC78-201ENST00000293889 OR2L3Q8NG85 312 aa17.12■□□□□ 0.33
CCDC78-201ENST00000293889 OR4F6Q8NGB9 312 aa17.12■□□□□ 0.33
CCDC78-201ENST00000293889 BAHD1Q8TBE0 780 aaPredicted RBP17.12■□□□□ 0.33
CCDC78-201ENST00000293889 AGR3Q8TD06 166 aa17.12■□□□□ 0.33
CCDC78-201ENST00000293889 RHBDD1Q8TEB9 315 aa17.12■□□□□ 0.33
CCDC78-201ENST00000293889 NTMT1Q9BV86 223 aa17.12■□□□□ 0.33
CCDC78-201ENST00000293889 ILKAPQ9H0C8 392 aaPredicted RBP17.12■□□□□ 0.33
CCDC78-201ENST00000293889 ZDHHC2Q9UIJ5 367 aa17.12■□□□□ 0.33
CCDC78-201ENST00000293889 ZFP69BQ9UJL9 534 aa17.12■□□□□ 0.33
CCDC78-201ENST00000293889 HAO1Q9UJM8 370 aa17.12■□□□□ 0.33
CCDC78-201ENST00000293889 STK38LQ9Y2H1 464 aa17.12■□□□□ 0.33
CCDC78-201ENST00000293889 RAP2CQ9Y3L5 183 aa17.12■□□□□ 0.33
CCDC78-201ENST00000293889 IGHV1OR21-1A0A087WYE8 117 aa17.11■□□□□ 0.33
CCDC78-201ENST00000293889 OR4F21O95013 312 aa17.11■□□□□ 0.33
CCDC78-201ENST00000293889 CLDN9O95484 217 aa17.11■□□□□ 0.33
CCDC78-201ENST00000293889 CDH1P12830 882 aa17.11■□□□□ 0.33
CCDC78-201ENST00000293889 CAPZBP47756 277 aa17.11■□□□□ 0.33
CCDC78-201ENST00000293889 PPP1CAP62136 330 aa17.11■□□□□ 0.33
CCDC78-201ENST00000293889 DAB2P98082 770 aa17.11■□□□□ 0.33
CCDC78-201ENST00000293889 IRF8Q02556 426 aa17.11■□□□□ 0.33
CCDC78-201ENST00000293889 CMPK2Q5EBM0 449 aa17.11■□□□□ 0.33
CCDC78-201ENST00000293889 XKR6Q5GH73 641 aa17.11■□□□□ 0.33
CCDC78-201ENST00000293889 CATSPEREQ5SY80 951 aa17.11■□□□□ 0.33
CCDC78-201ENST00000293889 ARMC6Q6NXE6 501 aa17.11■□□□□ 0.33
CCDC78-201ENST00000293889 NXPE4Q6UWF7 544 aa17.11■□□□□ 0.33
CCDC78-201ENST00000293889 EFL1Q7Z2Z2 1120 aaKnown RBP17.11■□□□□ 0.33
CCDC78-201ENST00000293889 CLNKQ7Z7G1 428 aa17.11■□□□□ 0.33
CCDC78-201ENST00000293889 TMPRSS11BQ86T26 416 aa17.11■□□□□ 0.33
CCDC78-201ENST00000293889 DEFB124Q8NES8 71 aa17.11■□□□□ 0.33
CCDC78-201ENST00000293889 NAT6Q93015 286 aa17.11■□□□□ 0.33
CCDC78-201ENST00000293889 CNDP2Q96KP4 475 aaKnown RBP17.11■□□□□ 0.33
CCDC78-201ENST00000293889 ACTR8Q9H981 624 aa17.11■□□□□ 0.33
CCDC78-201ENST00000293889 KCNK13Q9HB14 408 aa17.11■□□□□ 0.33
CCDC78-201ENST00000293889 PNPOQ9NVS9 261 aa17.11■□□□□ 0.33
CCDC78-201ENST00000293889 CUEDC1Q9NWM3 386 aaPredicted RBP17.11■□□□□ 0.33
CCDC78-201ENST00000293889 DLL3Q9NYJ7 618 aa17.11■□□□□ 0.33
CCDC78-201ENST00000293889 RNF11Q9Y3C5 154 aa17.11■□□□□ 0.33
CCDC78-201ENST00000293889 ASXL3Q9C0F0 2248 aa17.11■□□□□ 0.33
CCDC78-201ENST00000293889 SPEGQ15772 3267 aa17.11■□□□□ 0.33
CCDC78-201ENST00000293889 CNOT1A5YKK6 2376 aaKnown RBP17.11■□□□□ 0.33
CCDC78-201ENST00000293889 A8MUI8 341 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 TMEM233B4DJY2 109 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 GIPC1O14908 333 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 LDOC1O95751 146 aaPredicted RBP17.1■□□□□ 0.33
CCDC78-201ENST00000293889 EBLN1P0CF75 366 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 VARSP26640 1264 aaKnown RBP17.1■□□□□ 0.33
CCDC78-201ENST00000293889 PPM1FP49593 454 aaPredicted RBP17.1■□□□□ 0.33
CCDC78-201ENST00000293889 DUSP3P51452 185 aaPredicted RBP17.1■□□□□ 0.33
CCDC78-201ENST00000293889 ABATP80404 500 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 DOC2AQ14183 400 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 SH2D4BQ5SQS7 431 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 KIAA1614Q5VZ46 1190 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 SPESP1Q6UW49 350 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 SPRED1Q7Z699 444 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 TRIM73Q86UV7 250 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 CRLF3Q8IUI8 442 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 PTCD3Q96EY7 689 aaKnown RBP17.1■□□□□ 0.33
CCDC78-201ENST00000293889 KCNA7Q96RP8 456 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 MRPS30Q9NP92 439 aaKnown RBP17.1■□□□□ 0.33
CCDC78-201ENST00000293889 L3MBTL1Q9Y468 752 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 TRAF6Q9Y4K3 522 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 IGKV1-8A0A0C4DH67 115 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 CASC3O15234 703 aaKnown RBP17.1■□□□□ 0.33
CCDC78-201ENST00000293889 CCNDBP1O95273 360 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 FGF4P08620 206 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 C1GALT1C1LP0DN25 315 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 CD22P20273 847 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 CD1CP29017 333 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 CMPK1P30085 196 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 CASP2P42575 452 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 LSSP48449 732 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 FOXA1P55317 472 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 SLC5A12Q1EHB4 618 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 AMZ1Q400G9 498 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 ATG9BQ674R7 924 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 CLEC6AQ6EIG7 209 aa17.1■□□□□ 0.33
CCDC78-201ENST00000293889 MYLK4Q86YV6 388 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms