RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 CLDN11O75508 207 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 EOMESO95936 686 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 KDELR2P33947 212 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 STARD3Q14849 445 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 CHRNA6Q15825 494 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 STEAP3Q658P3 488 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 SLC16A12Q6ZSM3 486 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 CYP2U1Q7Z449 544 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 TCAIMQ8N3R3 496 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 C11orf16Q9NQ32 467 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 TIGARQ9NQ88 270 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 RAD18Q9NS91 495 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 SLC6A13Q9NSD5 602 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 ANKMY1Q9P2S6 941 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 SLCO3A1Q9UIG8 710 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 ILVBLA1L0T0 632 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 K7ERQ8 282 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 ARNTLO00327 626 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 CXCL14O95715 111 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 CSF2P04141 144 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 SYN1P17600 705 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 ATP6V1E1P36543 226 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 IFITM3Q01628 133 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 DSC3Q14574 896 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 RUNDC3AQ59EK9 446 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 CPZQ66K79 652 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 RHOXF1Q8NHV9 184 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 TMEM203Q969S6 136 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 TM9SF3Q9HD45 589 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 VNN3Q9NY84 501 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 FZD4Q9ULV1 537 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 BOLA1Q9Y3E2 137 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 SSC5DA1L4H1 1573 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 ANK1P16157 1881 aa13.01□□□□□ -0.33
SCAF4-201ENST00000286835 OR6C75A6NL08 312 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 SAP18O00422 153 aaKnown RBP13□□□□□ -0.33
SCAF4-201ENST00000286835 GABARAPO95166 117 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 SNX4O95219 450 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 INHBBP09529 407 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 ST3GAL4Q11206 333 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 TYSND1Q2T9J0 566 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 HKDC1Q2TB90 917 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 PTCHD3Q3KNS1 767 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 SPDYE7PQ495Y7 208 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 IRAK1BP1Q5VVH5 260 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 PLPP4Q5VZY2 271 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 ADGRG2Q8IZP9 1017 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 OR10G2Q8NGC3 310 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 OR5AK3PQ8NH89 298 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 ZNF675Q8TD23 568 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 DYRK4Q9NR20 520 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 UPK1BO75841 260 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 HOXC13P31276 330 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 SLC15A1P46059 708 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 ALDH9A1P49189 494 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 CDH4P55283 916 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 CDC42P60953 191 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 VLDLRP98155 873 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 TIAL1Q01085 375 aaKnown RBP eCLIP13□□□□□ -0.332e-6■■■■□ 22
SCAF4-201ENST00000286835 OR4A15Q8NGL6 344 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 CNDP2Q96KP4 475 aaKnown RBP13□□□□□ -0.33
SCAF4-201ENST00000286835 FEVQ99581 238 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 TTYH2Q9BSA4 534 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 ALOXE3Q9BYJ1 711 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 TAS2R16Q9NYV7 291 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 MALT1Q9UDY8 824 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 HAS3O00219 553 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 MAD2L1BPQ15013 274 aaPredicted RBP13□□□□□ -0.33
SCAF4-201ENST00000286835 DGKKQ5KSL6 1271 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 CPTPQ5TA50 214 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 AGAP7PQ5VUJ5 663 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 ATG9BQ674R7 924 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 CERS6Q6ZMG9 384 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 C11orf96Q7Z7L8 435 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 TRIM48Q8IWZ4 208 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 APIPQ96GX9 242 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 MMP27Q9H306 513 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 ACTL8Q9H568 366 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 SPG21Q9NZD8 308 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 RGPD3A6NKT7 1758 aaPredicted RBP13□□□□□ -0.33
SCAF4-201ENST00000286835 RGPD4Q7Z3J3 1758 aa13□□□□□ -0.33
SCAF4-201ENST00000286835 TRIM64CA6NLI5 447 aa12.99□□□□□ -0.33
SCAF4-201ENST00000286835 OR2AG2A6NM03 316 aa12.99□□□□□ -0.33
SCAF4-201ENST00000286835 IGLV3-25P01717 112 aa12.99□□□□□ -0.33
SCAF4-201ENST00000286835 GABRR2P28476 465 aa12.99□□□□□ -0.33
SCAF4-201ENST00000286835 CLK3P49761 638 aaKnown RBP12.99□□□□□ -0.33
SCAF4-201ENST00000286835 IL18R1Q13478 541 aa12.99□□□□□ -0.33
SCAF4-201ENST00000286835 VMACQ2NL98 169 aa12.99□□□□□ -0.33
SCAF4-201ENST00000286835 SHQ1Q6PI26 577 aaKnown RBP12.99□□□□□ -0.33
SCAF4-201ENST00000286835 FAM131AQ6UXB0 335 aa12.99□□□□□ -0.33
SCAF4-201ENST00000286835 CELF2-AS1Q8N7Q2 184 aa12.99□□□□□ -0.33
SCAF4-201ENST00000286835 TPT1P8Q9HAU6 139 aa12.99□□□□□ -0.33
SCAF4-201ENST00000286835 RPRD1BQ9NQG5 326 aaKnown RBP12.99□□□□□ -0.33
SCAF4-201ENST00000286835 TMCC3Q9ULS5 477 aa12.99□□□□□ -0.33
SCAF4-201ENST00000286835 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.99□□□□□ -0.33
SCAF4-201ENST00000286835 SERPIND1P05546 499 aa12.99□□□□□ -0.33
SCAF4-201ENST00000286835 CKMT1AP12532 417 aa12.99□□□□□ -0.33
SCAF4-201ENST00000286835 SLC6A4P31645 630 aa12.99□□□□□ -0.33
SCAF4-201ENST00000286835 LIPAP38571 399 aa12.99□□□□□ -0.33
SCAF4-201ENST00000286835 MVKQ03426 396 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms