RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 CACNA2D3Q8IZS8 1091 aa17.6■□□□□ 0.41
SDF4-201ENST00000263741 TCTN2Q96GX1 697 aa17.6■□□□□ 0.41
SDF4-201ENST00000263741 MRPL57Q9BQC6 102 aaKnown RBP17.6■□□□□ 0.41
SDF4-201ENST00000263741 TMEM121BQ9BXQ6 578 aaPredicted RBP17.6■□□□□ 0.41
SDF4-201ENST00000263741 TPRP12270 2363 aaKnown RBP17.6■□□□□ 0.41
SDF4-201ENST00000263741 A0A0J9YVX5 310 aa17.59■□□□□ 0.41
SDF4-201ENST00000263741 COPEO14579 308 aa17.59■□□□□ 0.41
SDF4-201ENST00000263741 HAT1O14929 419 aa17.59■□□□□ 0.41
SDF4-201ENST00000263741 GLRA3O75311 464 aa17.59■□□□□ 0.41
SDF4-201ENST00000263741 CCNDBP1O95273 360 aa17.59■□□□□ 0.41
SDF4-201ENST00000263741 STATHP02808 62 aa17.59■□□□□ 0.41
SDF4-201ENST00000263741 CCND1P24385 295 aa17.59■□□□□ 0.41
SDF4-201ENST00000263741 ZNF425Q6IV72 752 aa17.59■□□□□ 0.41
SDF4-201ENST00000263741 TMPRSS11BQ86T26 416 aa17.59■□□□□ 0.41
SDF4-201ENST00000263741 TCAIMQ8N3R3 496 aa17.59■□□□□ 0.41
SDF4-201ENST00000263741 SNX31Q8N9S9 440 aa17.59■□□□□ 0.41
SDF4-201ENST00000263741 SLC46A1Q96NT5 459 aa17.59■□□□□ 0.41
SDF4-201ENST00000263741 SPNS1Q9H2V7 528 aa17.59■□□□□ 0.41
SDF4-201ENST00000263741 OR2A25A4D2G3 310 aa17.59■□□□□ 0.41
SDF4-201ENST00000263741 B4E171 279 aa17.59■□□□□ 0.41
SDF4-201ENST00000263741 E7EQ34 232 aa17.59■□□□□ 0.41
SDF4-201ENST00000263741 POLR1CO15160 346 aaPredicted RBP17.59■□□□□ 0.41
SDF4-201ENST00000263741 RBMS1P29558 406 aaKnown RBP17.59■□□□□ 0.41
SDF4-201ENST00000263741 TSPAN7P41732 249 aa17.59■□□□□ 0.41
SDF4-201ENST00000263741 GABRA4P48169 554 aa17.59■□□□□ 0.41
SDF4-201ENST00000263741 SETDB1Q15047 1291 aa17.59■□□□□ 0.41
SDF4-201ENST00000263741 TMTC4Q5T4D3 741 aa17.59■□□□□ 0.41
SDF4-201ENST00000263741 GKAP1Q5VSY0 366 aaPredicted RBP17.59■□□□□ 0.41
SDF4-201ENST00000263741 FRMPD2BQ6IN97 320 aa17.59■□□□□ 0.41
SDF4-201ENST00000263741 PAQR7Q86WK9 346 aa17.59■□□□□ 0.41
SDF4-201ENST00000263741 OR1L3Q8NH93 324 aa17.59■□□□□ 0.41
SDF4-201ENST00000263741 ZNF501Q96CX3 271 aaPredicted RBP17.59■□□□□ 0.41
SDF4-201ENST00000263741 PLCD4Q9BRC7 762 aa17.59■□□□□ 0.41
SDF4-201ENST00000263741 CD244Q9BZW8 370 aa17.59■□□□□ 0.41
SDF4-201ENST00000263741 PCBD2Q9H0N5 130 aa17.59■□□□□ 0.41
SDF4-201ENST00000263741 SEC16AO15027 2179 aa17.58■□□□□ 0.41
SDF4-201ENST00000263741 ACACBO00763 2458 aa17.58■□□□□ 0.4
SDF4-201ENST00000263741 SCN3AQ9NY46 2000 aa17.58■□□□□ 0.4
SDF4-201ENST00000263741 FEZF1A0PJY2 475 aa17.58■□□□□ 0.4
SDF4-201ENST00000263741 TARM1B6A8C7 271 aa17.58■□□□□ 0.4
SDF4-201ENST00000263741 STK16O75716 305 aa17.58■□□□□ 0.4
SDF4-201ENST00000263741 ZNF28P17035 718 aa17.58■□□□□ 0.4
SDF4-201ENST00000263741 SLC5A2P31639 672 aa17.58■□□□□ 0.4
SDF4-201ENST00000263741 SLC18A2Q05940 514 aa17.58■□□□□ 0.4
SDF4-201ENST00000263741 IFT88Q13099 833 aa17.58■□□□□ 0.4
SDF4-201ENST00000263741 RPS27LQ71UM5 84 aaKnown RBP17.58■□□□□ 0.4
SDF4-201ENST00000263741 DNAJC22Q8N4W6 341 aa17.58■□□□□ 0.4
SDF4-201ENST00000263741 SLC5A11Q8WWX8 675 aa17.58■□□□□ 0.4
SDF4-201ENST00000263741 MOCOSQ96EN8 888 aa17.58■□□□□ 0.4
SDF4-201ENST00000263741 APOPT1Q96IL0 206 aa17.58■□□□□ 0.4
SDF4-201ENST00000263741 HAUS8Q9BT25 410 aa17.58■□□□□ 0.4
SDF4-201ENST00000263741 STARD5Q9NSY2 213 aa17.58■□□□□ 0.4
SDF4-201ENST00000263741 DYRK1BQ9Y463 629 aa17.58■□□□□ 0.4
SDF4-201ENST00000263741 MAP1BP46821 2468 aaKnown RBP17.58■□□□□ 0.4
SDF4-201ENST00000263741 A8MT66 165 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 KLK8O60259 260 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 EPORP19235 508 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 VARSP26640 1264 aaKnown RBP17.57■□□□□ 0.4
SDF4-201ENST00000263741 GGT5P36269 586 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 ALDH18A1P54886 795 aaKnown RBP17.57■□□□□ 0.4
SDF4-201ENST00000263741 CSNK1G2P78368 415 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 ABATP80404 500 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 ACY1Q03154 408 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 CDKL4Q5MAI5 379 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 PWWP2BQ6NUJ5 590 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 CPLX4Q7Z7G2 160 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 ZNF740Q8NDX6 193 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 UBTD2Q8WUN7 234 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 N4BP2L2Q92802 583 aaPredicted RBP17.57■□□□□ 0.4
SDF4-201ENST00000263741 TAAR9Q96RI9 348 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 FBXO8Q9NRD0 319 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 DNAJC11Q9NVH1 559 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 IRAK4Q9NWZ3 460 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 DCDC2Q9UHG0 476 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 RARRES3Q9UL19 164 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 ZFHX4Q86UP3 3567 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 CCDC88CQ9P219 2028 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 LOC105369274A0A096LPK9 316 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 LOC102723532A0A0G2JNH3 316 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 TEX51A0A1B0GUA7 166 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 CDRT15L2A8MXV6 281 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 MAP3K7O43318 606 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 PRAMEF4O60810 478 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 SMIM24O75264 130 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 IPO13O94829 963 aaKnown RBP17.57■□□□□ 0.4
SDF4-201ENST00000263741 FKBP9O95302 570 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 PROCP04070 461 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 GSTA1P08263 222 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 ATXN8OSP0DMR3 200 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 EEF1DP29692 281 aaKnown RBP17.57■□□□□ 0.4
SDF4-201ENST00000263741 CRHR1P34998 444 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 CDC16Q13042 620 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 DCAF12Q5T6F0 453 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 PRAMEF9Q5VWM5 478 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 KLHDC8AQ8IYD2 350 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 OR4N4Q8N0Y3 316 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 BANPQ8N9N5 519 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 ZUFSPQ96AP4 578 aa17.57■□□□□ 0.4
SDF4-201ENST00000263741 SPRTNQ9H040 489 aaPredicted RBP17.57■□□□□ 0.4
SDF4-201ENST00000263741 OPTCQ9UBM4 332 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms