RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 SFXN5Q8TD22 340 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 DNASE1L2Q92874 299 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 L3HYPDHQ96EM0 354 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 CD244Q9BZW8 370 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 EXO5Q9H790 373 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 PDLIM7Q9NR12 457 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 FKBP14Q9NWM8 211 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 EHD3Q9NZN3 535 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 PDE10AQ9Y233 779 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 MAU2Q9Y6X3 613 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 RCCD1A6NED2 376 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 EEDO75530 441 aaKnown RBP4.2□□□□□ -1.74
VPS13C-202ENST00000261517 HLA-DQB2P05538 268 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 H1F0P07305 194 aaKnown RBP4.2□□□□□ -1.74
VPS13C-202ENST00000261517 IL3P08700 152 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 GRK5P34947 590 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 SNAPC1Q16533 368 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 FAM171BQ6P995 826 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 PLEKHG7Q6ZR37 379 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 MRPL41Q8IXM3 137 aaKnown RBP4.2□□□□□ -1.74
VPS13C-202ENST00000261517 DBF4BQ8NFT6 615 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF689Q96CS4 500 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF354BQ96LW1 612 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 KAT8Q9H7Z6 458 aaKnown RBP4.2□□□□□ -1.74
VPS13C-202ENST00000261517 TAS2R9Q9NYW1 312 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 COPZ2Q9P299 210 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 HS3ST4Q9Y661 456 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 YJEFN3A6XGL0 299 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 ANGPTL1O95841 491 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 TOP3BO95985 862 aaKnown RBP4.2□□□□□ -1.74
VPS13C-202ENST00000261517 MARCKSL1P49006 195 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 LIN52Q52LA3 116 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 OR2T5Q6IEZ7 315 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 OR2T29Q8NH02 315 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 TBATAQ96M53 351 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 C16orf70Q9BSU1 422 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 GATA5Q9BWX5 397 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-202ENST00000261517 KLHL25Q9H0H3 589 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 MYNNQ9NPC7 610 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 TAS2R1Q9NYW7 299 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 GHRLQ9UBU3 117 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 ARPC4-TTLL3A0A0A6YYG9 625 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 FAAHO00519 579 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 S1PR4O95977 384 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 ACRV1P26436 265 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 BRCC3P46736 316 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 HNRNPKP61978 463 aaKnown RBP eCLIP4.2□□□□□ -1.74
VPS13C-202ENST00000261517 KLF1Q13351 362 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-202ENST00000261517 MANEAQ5SRI9 462 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 TMEM63BQ5T3F8 832 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 P2RY8Q86VZ1 359 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 DNAJB14Q8TBM8 379 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 TRUB1Q8WWH5 349 aaKnown RBP4.2□□□□□ -1.74
VPS13C-202ENST00000261517 DDX1Q92499 740 aaKnown RBP4.2□□□□□ -1.74
VPS13C-202ENST00000261517 NXNL1Q96CM4 212 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 SLC7A6OSQ96CW6 309 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-202ENST00000261517 IGFLR1Q9H665 355 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 APOBEC3GQ9HC16 384 aaKnown RBP4.2□□□□□ -1.74
VPS13C-202ENST00000261517 IL37Q9NZH6 218 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 GPR34Q9UPC5 381 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 PLEKHA6Q9Y2H5 1048 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 TESMINQ9Y4I5 508 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 HES2Q9Y543 173 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 PCDHGA3Q9Y5H0 932 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 CDH10Q9Y6N8 788 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 THSD7AQ9UPZ6 1657 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 ANKRD28O15084 1053 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 USP12O75317 370 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 FGF18O76093 207 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 ACVR2AP27037 513 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 CSKP41240 450 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 MASP1P48740 699 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 ENPP2Q13822 863 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 NAA30Q147X3 362 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-202ENST00000261517 TRAM2Q15035 370 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 KCTD21Q4G0X4 260 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 SIRPB2Q5JXA9 342 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 HACD4Q5VWC8 232 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 TMIGD1Q6UXZ0 262 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 GALNT6Q8NCL4 622 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 PSD4Q8NDX1 1056 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 TMEM125Q96AQ2 219 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 NFKBIL1Q9UBC1 381 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-202ENST00000261517 SRPK3Q9UPE1 567 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 OR1F1O43749 312 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 HLA-DPB1P04440 258 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 CYBAP13498 195 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 SLC6A6P31641 620 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 TNFRSF4P43489 277 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 SLC6A8P48029 635 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 MTTPP55157 894 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 TIGD2Q4W5G0 525 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 ALFQ53S48 1182 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 FAAH2Q6GMR7 532 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 PGM2L1Q6PCE3 622 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 PLET1Q6UQ28 207 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 DEF8Q6ZN54 512 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 SMIM5Q71RC9 77 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 TMEM135Q86UB9 458 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 CAND1Q86VP6 1230 aaKnown RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms