RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 IFNL1Q8IU54 200 aa15.69■□□□□ 0.1
SNCAIP-202ENST00000261368 OR4K1Q8NGD4 311 aa15.69■□□□□ 0.1
SNCAIP-202ENST00000261368 OR6Q1Q8NGQ2 317 aa15.69■□□□□ 0.1
SNCAIP-202ENST00000261368 MAGIXQ9H6Y5 334 aa15.69■□□□□ 0.1
SNCAIP-202ENST00000261368 IL1RAPQ9NPH3 570 aa15.69■□□□□ 0.1
SNCAIP-202ENST00000261368 LSM7Q9UK45 103 aaKnown RBP15.69■□□□□ 0.1
SNCAIP-202ENST00000261368 B3GNT3Q9Y2A9 372 aa15.69■□□□□ 0.1
SNCAIP-202ENST00000261368 CAB39Q9Y376 341 aaPredicted RBP15.69■□□□□ 0.1
SNCAIP-202ENST00000261368 DOCK4Q8N1I0 1966 aa15.69■□□□□ 0.1
SNCAIP-202ENST00000261368 NPIPB15A6NHN6 443 aaPredicted RBP15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 SOBPA7XYQ1 873 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 CHRM5P08912 532 aaPredicted RBP15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 ANXA4P09525 319 aaPredicted RBP15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 GANABQ14697 944 aaKnown RBP15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 HIST2H2ACQ16777 129 aaPredicted RBP15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 ZNF404Q494X3 552 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 TRIM60Q495X7 471 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 ARMC8Q8IUR7 673 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 OR5AK3PQ8NH89 298 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 PIH1D2Q8WWB5 315 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 PDLIM5Q96HC4 596 aaKnown RBP15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 TCF25Q9BQ70 676 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 HTATIP2Q9BUP3 242 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 ITPAQ9BY32 194 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 NUAK2Q9H093 628 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 TPK1Q9H3S4 243 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 RNF167Q9H6Y7 350 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 BRD9Q9H8M2 597 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 NECTIN3Q9NQS3 549 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 WDR37Q9Y2I8 494 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 F11P03951 625 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 KRT8P05787 483 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 GJA1P17302 382 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 CCR7P32248 378 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 ALG1LQ6GMV1 187 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 AKAP14Q86UN6 197 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 SPATA17Q96L03 361 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 FEVQ99581 238 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 DUSP26Q9BV47 211 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 SGK2Q9HBY8 427 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 GPR83Q9NYM4 423 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 RNF6Q9Y252 685 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 SLC16A6O15403 523 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 MFN2O95140 757 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 GALTP07902 379 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 STSP08842 583 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 GSTT2P0CG29 244 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 GSTT2BP0CG30 244 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 PCMT1P22061 227 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 CHI3L1P36222 383 aaPredicted RBP15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 CTSKP43235 329 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 SLC35A2P78381 396 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 STARD3Q14849 445 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 PLEKHG6Q3KR16 790 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 SPANXN2Q5MJ10 180 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 FAM180BQ6P0A1 224 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 C1orf52Q8N6N3 182 aaKnown RBP15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 OR4A15Q8NGL6 344 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 FOXJ1Q92949 421 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 SCAMP4Q969E2 229 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 Q96MT0 163 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 SLC29A3Q9BZD2 475 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 CEP44Q9C0F1 390 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 RAD18Q9NS91 495 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 RHCGQ9UBD6 479 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 POU2F3Q9UKI9 436 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 MAP4K5Q9Y4K4 846 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 CCL27Q9Y4X3 112 aa15.68■□□□□ 0.1
SNCAIP-202ENST00000261368 HTR3EA5X5Y0 456 aa15.67■□□□□ 0.1
SNCAIP-202ENST00000261368 MED26O95402 600 aa15.67■□□□□ 0.1
SNCAIP-202ENST00000261368 PRPS1L1P21108 318 aa15.67■□□□□ 0.1
SNCAIP-202ENST00000261368 AZGP1P25311 298 aaKnown RBP15.67■□□□□ 0.1
SNCAIP-202ENST00000261368 RECQLP46063 649 aaPredicted RBP15.67■□□□□ 0.1
SNCAIP-202ENST00000261368 CCL23P55773 120 aa15.67■□□□□ 0.1
SNCAIP-202ENST00000261368 MRPS15P82914 257 aaKnown RBP15.67■□□□□ 0.1
SNCAIP-202ENST00000261368 ELP6Q0PNE2 266 aa15.67■□□□□ 0.1
SNCAIP-202ENST00000261368 GPRC6AQ5T6X5 926 aa15.67■□□□□ 0.1
SNCAIP-202ENST00000261368 TRIM46Q7Z4K8 759 aa15.67■□□□□ 0.1
SNCAIP-202ENST00000261368 DNASE1L2Q92874 299 aa15.67■□□□□ 0.1
SNCAIP-202ENST00000261368 NTMT1Q9BV86 223 aa15.67■□□□□ 0.1
SNCAIP-202ENST00000261368 EHD3Q9NZN3 535 aa15.67■□□□□ 0.1
SNCAIP-202ENST00000261368 PCDHGA12O60330 932 aa15.67■□□□□ 0.1
SNCAIP-202ENST00000261368 ADAMTS4O75173 837 aa15.67■□□□□ 0.1
SNCAIP-202ENST00000261368 HOXD12P35452 270 aa15.67■□□□□ 0.1
SNCAIP-202ENST00000261368 USP45Q70EL2 814 aa15.67■□□□□ 0.1
SNCAIP-202ENST00000261368 CHST9Q7L1S5 443 aa15.67■□□□□ 0.1
SNCAIP-202ENST00000261368 LMNTD1Q8N9Z9 388 aa15.67■□□□□ 0.1
SNCAIP-202ENST00000261368 MYDGFQ969H8 173 aa15.67■□□□□ 0.1
SNCAIP-202ENST00000261368 AKIP1Q9NQ31 210 aa15.67■□□□□ 0.1
SNCAIP-202ENST00000261368 RAB23Q9ULC3 237 aa15.67■□□□□ 0.1
SNCAIP-202ENST00000261368 GREB1Q4ZG55 1949 aa15.67■□□□□ 0.1
SNCAIP-202ENST00000261368 CD40LGP29965 261 aa15.67■□□□□ 0.1
SNCAIP-202ENST00000261368 NRIP1P48552 1158 aa15.67■□□□□ 0.1
SNCAIP-202ENST00000261368 TPRG1LQ5T0D9 272 aa15.67■□□□□ 0.1
SNCAIP-202ENST00000261368 LAIR1Q6GTX8 287 aa15.67■□□□□ 0.1
SNCAIP-202ENST00000261368 VRK3Q8IV63 474 aa15.67■□□□□ 0.1
SNCAIP-202ENST00000261368 Q8N9G6 341 aaPredicted RBP15.67■□□□□ 0.1
SNCAIP-202ENST00000261368 CSGALNACT1Q8TDX6 532 aa15.67■□□□□ 0.1
SNCAIP-202ENST00000261368 MYLIPQ8WY64 445 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms