RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 STRADBQ9C0K7 418 aa19.92■□□□□ 0.78
RTCA-201ENST00000260563 ILKAPQ9H0C8 392 aaPredicted RBP19.92■□□□□ 0.78
RTCA-201ENST00000260563 DNAJC11Q9NVH1 559 aa19.92■□□□□ 0.78
RTCA-201ENST00000260563 SLC22A14Q9Y267 594 aa19.92■□□□□ 0.78
RTCA-201ENST00000260563 RAP2CQ9Y3L5 183 aa19.92■□□□□ 0.78
RTCA-201ENST00000260563 PPP6CO00743 305 aa19.91■□□□□ 0.78
RTCA-201ENST00000260563 UBFD1O14562 309 aaKnown RBP19.91■□□□□ 0.78
RTCA-201ENST00000260563 DRD4P21917 467 aa19.91■□□□□ 0.78
RTCA-201ENST00000260563 CMPK1P30085 196 aa19.91■□□□□ 0.78
RTCA-201ENST00000260563 RBBP7Q16576 425 aa19.91■□□□□ 0.78
RTCA-201ENST00000260563 ICE2Q659A1 982 aa19.91■□□□□ 0.78
RTCA-201ENST00000260563 LCTLQ6UWM7 567 aa19.91■□□□□ 0.78
RTCA-201ENST00000260563 CPLX4Q7Z7G2 160 aa19.91■□□□□ 0.78
RTCA-201ENST00000260563 THOC6Q86W42 341 aaKnown RBP19.91■□□□□ 0.78
RTCA-201ENST00000260563 CACTIN-AS1Q8N1I8 211 aa19.91■□□□□ 0.78
RTCA-201ENST00000260563 CHCHD4Q8N4Q1 142 aa19.91■□□□□ 0.78
RTCA-201ENST00000260563 OR2L3Q8NG85 312 aa19.91■□□□□ 0.78
RTCA-201ENST00000260563 FAM107BQ9H098 131 aa19.91■□□□□ 0.78
RTCA-201ENST00000260563 ZNF768Q9H5H4 540 aaKnown RBP19.91■□□□□ 0.78
RTCA-201ENST00000260563 RABEP2Q9H5N1 569 aa19.91■□□□□ 0.78
RTCA-201ENST00000260563 NOL11Q9H8H0 719 aaKnown RBP19.91■□□□□ 0.78
RTCA-201ENST00000260563 IPPKQ9H8X2 491 aa19.91■□□□□ 0.78
RTCA-201ENST00000260563 MRPS30Q9NP92 439 aaKnown RBP19.91■□□□□ 0.78
RTCA-201ENST00000260563 INTS7Q9NVH2 962 aaKnown RBP19.91■□□□□ 0.78
RTCA-201ENST00000260563 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.91■□□□□ 0.78
RTCA-201ENST00000260563 IGHV5-51A0A0C4DH38 117 aa19.9■□□□□ 0.78
RTCA-201ENST00000260563 HGSO14964 777 aaPredicted RBP19.9■□□□□ 0.78
RTCA-201ENST00000260563 KATNA1O75449 491 aa19.9■□□□□ 0.78
RTCA-201ENST00000260563 LSSP48449 732 aa19.9■□□□□ 0.78
RTCA-201ENST00000260563 SEPHS1P49903 392 aa19.9■□□□□ 0.78
RTCA-201ENST00000260563 TMPRSS7Q7RTY8 843 aa19.9■□□□□ 0.78
RTCA-201ENST00000260563 ARHGAP22Q7Z5H3 698 aa19.9■□□□□ 0.78
RTCA-201ENST00000260563 FAM20CQ8IXL6 584 aa19.9■□□□□ 0.78
RTCA-201ENST00000260563 SNX31Q8N9S9 440 aa19.9■□□□□ 0.78
RTCA-201ENST00000260563 PIWIL2Q8TC59 973 aaKnown RBP19.9■□□□□ 0.78
RTCA-201ENST00000260563 AGAP11Q8TF27 550 aa19.9■□□□□ 0.78
RTCA-201ENST00000260563 GRAMD1AQ96CP6 724 aa19.9■□□□□ 0.78
RTCA-201ENST00000260563 ZNF382Q96SR6 550 aa19.9■□□□□ 0.78
RTCA-201ENST00000260563 HAUS8Q9BT25 410 aa19.9■□□□□ 0.78
RTCA-201ENST00000260563 MID1IP1Q9NPA3 183 aa19.9■□□□□ 0.78
RTCA-201ENST00000260563 SOHLH2Q9NX45 425 aa19.9■□□□□ 0.78
RTCA-201ENST00000260563 SEMA5BQ9P283 1151 aa19.9■□□□□ 0.78
RTCA-201ENST00000260563 ZDHHC2Q9UIJ5 367 aa19.9■□□□□ 0.78
RTCA-201ENST00000260563 HAO1Q9UJM8 370 aa19.9■□□□□ 0.78
RTCA-201ENST00000260563 STK38LQ9Y2H1 464 aa19.9■□□□□ 0.78
RTCA-201ENST00000260563 OR7A17O14581 309 aa19.89■□□□□ 0.77
RTCA-201ENST00000260563 ZBTB11O95625 1053 aaPredicted RBP19.89■□□□□ 0.77
RTCA-201ENST00000260563 PVRP15151 417 aa19.89■□□□□ 0.77
RTCA-201ENST00000260563 ST6GAL1P15907 406 aa19.89■□□□□ 0.77
RTCA-201ENST00000260563 MAGP20916 626 aa19.89■□□□□ 0.77
RTCA-201ENST00000260563 SH3BP2P78314 561 aa19.89■□□□□ 0.77
RTCA-201ENST00000260563 ABATP80404 500 aa19.89■□□□□ 0.77
RTCA-201ENST00000260563 FOXC1Q12948 553 aa19.89■□□□□ 0.77
RTCA-201ENST00000260563 NAA25Q14CX7 972 aa19.89■□□□□ 0.77
RTCA-201ENST00000260563 KIAA1614Q5VZ46 1190 aa19.89■□□□□ 0.77
RTCA-201ENST00000260563 CGB2Q6NT52 195 aa19.89■□□□□ 0.77
RTCA-201ENST00000260563 KMT5CQ86Y97 462 aa19.89■□□□□ 0.77
RTCA-201ENST00000260563 C19orf47Q8N9M1 422 aaKnown RBP19.89■□□□□ 0.77
RTCA-201ENST00000260563 OR52B6Q8NGF0 335 aa19.89■□□□□ 0.77
RTCA-201ENST00000260563 ATP6V1E2Q96A05 226 aa19.89■□□□□ 0.77
RTCA-201ENST00000260563 LIN37Q96GY3 246 aaPredicted RBP19.89■□□□□ 0.77
RTCA-201ENST00000260563 CCT8L2Q96SF2 557 aa19.89■□□□□ 0.77
RTCA-201ENST00000260563 PNPOQ9NVS9 261 aa19.89■□□□□ 0.77
RTCA-201ENST00000260563 AKAP7Q9P0M2 348 aaPredicted RBP19.89■□□□□ 0.77
RTCA-201ENST00000260563 MARCOQ9UEW3 520 aaPredicted RBP19.89■□□□□ 0.77
RTCA-201ENST00000260563 MDC1Q14676 2089 aaKnown RBP19.89■□□□□ 0.77
RTCA-201ENST00000260563 FAM149AA5PLN7 773 aa19.88■□□□□ 0.77
RTCA-201ENST00000260563 SLC9B1P1A6NJY1 282 aa19.88■□□□□ 0.77
RTCA-201ENST00000260563 TGDSO95455 350 aa19.88■□□□□ 0.77
RTCA-201ENST00000260563 OTCP00480 354 aa19.88■□□□□ 0.77
RTCA-201ENST00000260563 KITP10721 976 aa19.88■□□□□ 0.77
RTCA-201ENST00000260563 EPORP19235 508 aa19.88■□□□□ 0.77
RTCA-201ENST00000260563 CSTF2P33240 577 aaKnown RBP eCLIP19.88■□□□□ 0.77
RTCA-201ENST00000260563 ARL4DP49703 201 aa19.88■□□□□ 0.77
RTCA-201ENST00000260563 RPL14P50914 215 aaKnown RBP19.88■□□□□ 0.77
RTCA-201ENST00000260563 CCNG1P51959 295 aa19.88■□□□□ 0.77
RTCA-201ENST00000260563 PRDX1Q06830 199 aaKnown RBP19.88■□□□□ 0.77
RTCA-201ENST00000260563 CDC16Q13042 620 aa19.88■□□□□ 0.77
RTCA-201ENST00000260563 TARDBPQ13148 414 aaKnown RBP eCLIP19.88■□□□□ 0.77
RTCA-201ENST00000260563 SH2D4BQ5SQS7 431 aa19.88■□□□□ 0.77
RTCA-201ENST00000260563 C17orf64Q86WR6 236 aa19.88■□□□□ 0.77
RTCA-201ENST00000260563 AGR3Q8TD06 166 aa19.88■□□□□ 0.77
RTCA-201ENST00000260563 TRAPPC9Q96Q05 1148 aa19.88■□□□□ 0.77
RTCA-201ENST00000260563 OR4K3Q96R72 315 aa19.88■□□□□ 0.77
RTCA-201ENST00000260563 KLHL25Q9H0H3 589 aa19.88■□□□□ 0.77
RTCA-201ENST00000260563 DYRK1BQ9Y463 629 aa19.88■□□□□ 0.77
RTCA-201ENST00000260563 A0A1B0GTL3 188 aa19.87■□□□□ 0.77
RTCA-201ENST00000260563 MAP3K7O43318 606 aa19.87■□□□□ 0.77
RTCA-201ENST00000260563 ESRRBO95718 433 aa19.87■□□□□ 0.77
RTCA-201ENST00000260563 FAM107AO95990 144 aa19.87■□□□□ 0.77
RTCA-201ENST00000260563 ARL1P40616 181 aaPredicted RBP19.87■□□□□ 0.77
RTCA-201ENST00000260563 MLLT3P42568 568 aaPredicted RBP19.87■□□□□ 0.77
RTCA-201ENST00000260563 PKNOX1P55347 436 aa19.87■□□□□ 0.77
RTCA-201ENST00000260563 C16orf72Q14CZ0 275 aa19.87■□□□□ 0.77
RTCA-201ENST00000260563 GPRIN3Q6ZVF9 776 aa19.87■□□□□ 0.77
RTCA-201ENST00000260563 SYVN1Q86TM6 617 aa19.87■□□□□ 0.77
RTCA-201ENST00000260563 KIRREL3Q8IZU9 778 aa19.87■□□□□ 0.77
RTCA-201ENST00000260563 AGBL5Q8NDL9 886 aa19.87■□□□□ 0.77
RTCA-201ENST00000260563 KLHL6Q8WZ60 621 aa19.87■□□□□ 0.77
RTCA-201ENST00000260563 CMKLR1Q99788 373 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms