RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 KCNH6Q9H252 994 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 TPT1P8Q9HAU6 139 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 DNAJC11Q9NVH1 559 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 SIRT5Q9NXA8 310 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 B4GALT6Q9UBX8 382 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 PCDHGA10Q9Y5H3 936 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 SMIM30A4D0T7 59 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 E7EQ34 232 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 NEDD8-MDP1E9PL57 170 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 MYO1DO94832 1006 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 IMPDH2P12268 514 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 BMP4P12644 408 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 PORP16435 677 aaPredicted RBP13.09□□□□□ -0.31
VHL-201ENST00000256474 KRT20P35900 424 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 RECQLP46063 649 aaPredicted RBP13.09□□□□□ -0.31
VHL-201ENST00000256474 CLDN8P56748 225 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 CATSPEREQ5SY80 951 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 CYB5D2Q8WUJ1 264 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 MUL1Q969V5 352 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 LGALS12Q96DT0 336 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 TRIM39Q9HCM9 518 aa13.09□□□□□ -0.31
VHL-201ENST00000256474 TMEM189-UBE2V1I3L0A0 370 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 TGFB1P01137 390 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 SERPINB1P30740 379 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 HNF4AP41235 474 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 AP1S1P61966 158 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 ABHD18Q0P651 414 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 BTG3Q14201 252 aaPredicted RBP13.08□□□□□ -0.32
VHL-201ENST00000256474 VMACQ2NL98 169 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 ZXDCQ2QGD7 858 aaPredicted RBP13.08□□□□□ -0.32
VHL-201ENST00000256474 ALG1LQ6GMV1 187 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 ABHD8Q96I13 439 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 ZNF347Q96SE7 839 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 TCF25Q9BQ70 676 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 CORO1BQ9BR76 489 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 SERHLQ9NQF3 203 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 RAD18Q9NS91 495 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 CHD7Q9P2D1 2997 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 LHCGRP22888 699 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 EPHB3P54753 998 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 IFITM3Q01628 133 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 MC1RQ01726 317 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 MED22Q15528 200 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 TCEA2Q15560 299 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 CTF1Q16619 201 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 USP45Q70EL2 814 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 C11orf96Q7Z7L8 435 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 ZNF461Q8TAF7 563 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 DOK1Q99704 481 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 NEURL2Q9BR09 285 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 KLF16Q9BXK1 252 aaPredicted RBP13.08□□□□□ -0.32
VHL-201ENST00000256474 TPK1Q9H3S4 243 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 RAB23Q9ULC3 237 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 SUV39H1O43463 412 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 CA12O43570 354 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 AIREO43918 545 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 PRAMEF4O60810 478 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 ETFAP13804 333 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 CYP2A7P20853 494 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 PAX3P23760 479 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 PRAMEF9Q5VWM5 478 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 OR4A15Q8NGL6 344 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 ALPK1Q96QP1 1244 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 HTATIP2Q9BUP3 242 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 DCSTAMPQ9H295 470 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 GPR83Q9NYM4 423 aa13.08□□□□□ -0.32
VHL-201ENST00000256474 J3KTA2 159 aa13.07□□□□□ -0.32
VHL-201ENST00000256474 UGT2B11O75310 529 aa13.07□□□□□ -0.32
VHL-201ENST00000256474 CCNDBP1O95273 360 aa13.07□□□□□ -0.32
VHL-201ENST00000256474 ETV3P41162 512 aa13.07□□□□□ -0.32
VHL-201ENST00000256474 CD97P48960 835 aa13.07□□□□□ -0.32
VHL-201ENST00000256474 ALDH9A1P49189 494 aa13.07□□□□□ -0.32
VHL-201ENST00000256474 TOP3AQ13472 1001 aaPredicted RBP13.07□□□□□ -0.32
VHL-201ENST00000256474 ATG9BQ674R7 924 aa13.07□□□□□ -0.32
VHL-201ENST00000256474 CHST9Q7L1S5 443 aa13.07□□□□□ -0.32
VHL-201ENST00000256474 CCDC103Q8IW40 242 aa13.07□□□□□ -0.32
VHL-201ENST00000256474 TAGAPQ8N103 731 aa13.07□□□□□ -0.32
VHL-201ENST00000256474 NAGSQ8N159 534 aa13.07□□□□□ -0.32
VHL-201ENST00000256474 OR2AP1Q8NGE2 309 aa13.07□□□□□ -0.32
VHL-201ENST00000256474 MRPS31Q92665 395 aaKnown RBP13.07□□□□□ -0.32
VHL-201ENST00000256474 IL4I1Q96RQ9 567 aa13.07□□□□□ -0.32
VHL-201ENST00000256474 FEVQ99581 238 aa13.07□□□□□ -0.32
VHL-201ENST00000256474 WRAP53Q9BUR4 548 aaKnown RBP13.07□□□□□ -0.32
VHL-201ENST00000256474 DUSP26Q9BV47 211 aa13.07□□□□□ -0.32
VHL-201ENST00000256474 ZDHHC4Q9NPG8 344 aa13.07□□□□□ -0.32
VHL-201ENST00000256474 INIPQ9NRY2 104 aa13.07□□□□□ -0.32
VHL-201ENST00000256474 ATAD3AQ9NVI7 634 aa13.07□□□□□ -0.32
VHL-201ENST00000256474 SCN10AQ9Y5Y9 1956 aa13.07□□□□□ -0.32
VHL-201ENST00000256474 TNFRSF11BO00300 401 aa13.07□□□□□ -0.32
VHL-201ENST00000256474 STSP08842 583 aa13.07□□□□□ -0.32
VHL-201ENST00000256474 EPORP19235 508 aa13.07□□□□□ -0.32
VHL-201ENST00000256474 SREBF2Q12772 1141 aa13.07□□□□□ -0.32
VHL-201ENST00000256474 GRSF1Q12849 480 aaKnown RBP eCLIP13.07□□□□□ -0.32
VHL-201ENST00000256474 CAMK2GQ13555 558 aaPredicted RBP13.07□□□□□ -0.32
VHL-201ENST00000256474 CPTPQ5TA50 214 aa13.07□□□□□ -0.32
VHL-201ENST00000256474 IRAK1BP1Q5VVH5 260 aa13.07□□□□□ -0.32
VHL-201ENST00000256474 FKBP10Q96AY3 582 aa13.07□□□□□ -0.32
VHL-201ENST00000256474 KCNS3Q9BQ31 491 aa13.07□□□□□ -0.32
VHL-201ENST00000256474 OR51B5Q9H339 312 aa13.07□□□□□ -0.32
VHL-201ENST00000256474 CTPS2Q9NRF8 586 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms