RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 FUT8Q9BYC5 575 aa12.21□□□□□ -0.45
VPREB3-201ENST00000248948 DERL2Q9GZP9 239 aa12.21□□□□□ -0.45
VPREB3-201ENST00000248948 WDR54Q9H977 334 aa12.21□□□□□ -0.45
VPREB3-201ENST00000248948 TMEM184CQ9NVA4 438 aa12.21□□□□□ -0.45
VPREB3-201ENST00000248948 CUEDC1Q9NWM3 386 aaPredicted RBP12.21□□□□□ -0.45
VPREB3-201ENST00000248948 GEMIN8Q9NWZ8 242 aaKnown RBP12.21□□□□□ -0.45
VPREB3-201ENST00000248948 IFT80Q9P2H3 777 aaPredicted RBP12.21□□□□□ -0.45
VPREB3-201ENST00000248948 GPN3Q9UHW5 284 aaPredicted RBP12.21□□□□□ -0.45
VPREB3-201ENST00000248948 DMGDHQ9UI17 866 aaKnown RBP12.21□□□□□ -0.45
VPREB3-201ENST00000248948 NXT1Q9UKK6 140 aaKnown RBP12.21□□□□□ -0.45
VPREB3-201ENST00000248948 MAN2B2Q9Y2E5 1009 aa12.21□□□□□ -0.45
VPREB3-201ENST00000248948 KCNMB2Q9Y691 235 aa12.21□□□□□ -0.45
VPREB3-201ENST00000248948 HYKKA2RU49 373 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 H0YGG7 62 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 HAT1O14929 419 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 PRPF4O43172 522 aaKnown RBP eCLIP12.2□□□□□ -0.46
VPREB3-201ENST00000248948 PIAS1O75925 651 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 ALBP02768 609 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 FURINP09958 794 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 ITGAXP20702 1163 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 ECHS1P30084 290 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 FOLR3P41439 243 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 RAB10P61026 200 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 ARF3P61204 181 aaPredicted RBP12.2□□□□□ -0.46
VPREB3-201ENST00000248948 ATP6V0D1P61421 351 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 RPS15AP62244 130 aaKnown RBP12.2□□□□□ -0.46
VPREB3-201ENST00000248948 KCNAB2Q13303 367 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 NAE1Q13564 534 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 USP10Q14694 798 aaKnown RBP12.2□□□□□ -0.46
VPREB3-201ENST00000248948 SLMAPQ14BN4 828 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 MUM1Q2TAK8 710 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 DEFB109BQ30KR1 87 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 WASHC2DQ5SRD0 308 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 TTLL10Q6ZVT0 673 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 FRA10AC1Q70Z53 315 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 RAB43Q86YS6 212 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 OR2Y1Q8NGV0 311 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 ANKRD49Q8WVL7 239 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 THAP11Q96EK4 314 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 C10orf90Q96M02 699 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 OR2A5Q96R48 311 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 CYTH2Q99418 400 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 ATG10Q9H0Y0 220 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 SLC26A1Q9H2B4 701 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 CDC42EP4Q9H3Q1 356 aaKnown RBP12.2□□□□□ -0.46
VPREB3-201ENST00000248948 ACSS3Q9H6R3 686 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 CAB39LQ9H9S4 337 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 NINJ2Q9NZG7 142 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 CTNNAL1Q9UBT7 734 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 IKZF3Q9UKT9 509 aa12.2□□□□□ -0.46
VPREB3-201ENST00000248948 MTO1Q9Y2Z2 717 aaKnown RBP12.2□□□□□ -0.46
VPREB3-201ENST00000248948 PCSK5Q92824 1860 aa12.19□□□□□ -0.46
VPREB3-201ENST00000248948 KCNE1BA0A087WTH5 132 aa12.19□□□□□ -0.46
VPREB3-201ENST00000248948 LOC105369274A0A096LPK9 316 aa12.19□□□□□ -0.46
VPREB3-201ENST00000248948 LOC102723532A0A0G2JNH3 316 aa12.19□□□□□ -0.46
VPREB3-201ENST00000248948 CDC7O00311 574 aa12.19□□□□□ -0.46
VPREB3-201ENST00000248948 PHGDHO43175 533 aaKnown RBP12.19□□□□□ -0.46
VPREB3-201ENST00000248948 RFPL1O75677 317 aa12.19□□□□□ -0.46
VPREB3-201ENST00000248948 KLF7O75840 302 aaPredicted RBP12.19□□□□□ -0.46
VPREB3-201ENST00000248948 GUCA1CO95843 209 aa12.19□□□□□ -0.46
VPREB3-201ENST00000248948 ANXA5P08758 320 aa12.19□□□□□ -0.46
VPREB3-201ENST00000248948 SLC26A3P40879 764 aa12.19□□□□□ -0.46
VPREB3-201ENST00000248948 NFKB2Q00653 900 aa12.19□□□□□ -0.46
VPREB3-201ENST00000248948 EFTUD2Q15029 972 aaKnown RBP eCLIP12.19□□□□□ -0.46
VPREB3-201ENST00000248948 TSNQ15631 228 aaKnown RBP12.19□□□□□ -0.46
VPREB3-201ENST00000248948 CDKL4Q5MAI5 379 aa12.19□□□□□ -0.46
VPREB3-201ENST00000248948 FBXO42Q6P3S6 717 aa12.19□□□□□ -0.46
VPREB3-201ENST00000248948 COX15Q7KZN9 410 aa12.19□□□□□ -0.46
VPREB3-201ENST00000248948 KLHDC8AQ8IYD2 350 aa12.19□□□□□ -0.46
VPREB3-201ENST00000248948 OR4N4Q8N0Y3 316 aa12.19□□□□□ -0.46
VPREB3-201ENST00000248948 TCAIMQ8N3R3 496 aa12.19□□□□□ -0.46
VPREB3-201ENST00000248948 ZNF843Q8N446 348 aa12.19□□□□□ -0.46
VPREB3-201ENST00000248948 EXD3Q8N9H8 876 aa12.19□□□□□ -0.46
VPREB3-201ENST00000248948 ABHD11Q8NFV4 315 aa12.19□□□□□ -0.46
VPREB3-201ENST00000248948 NACC2Q96BF6 587 aa12.19□□□□□ -0.46
VPREB3-201ENST00000248948 CABS1Q96KC9 395 aa12.19□□□□□ -0.46
VPREB3-201ENST00000248948 IP6K3Q96PC2 410 aa12.19□□□□□ -0.46
VPREB3-201ENST00000248948 SARGQ9BW04 601 aa12.19□□□□□ -0.46
VPREB3-201ENST00000248948 SEMA4CQ9C0C4 833 aa12.19□□□□□ -0.46
VPREB3-201ENST00000248948 SYNPO2LQ9H987 977 aa12.19□□□□□ -0.46
VPREB3-201ENST00000248948 SLC22A11Q9NSA0 550 aa12.19□□□□□ -0.46
VPREB3-201ENST00000248948 STARD5Q9NSY2 213 aa12.19□□□□□ -0.46
VPREB3-201ENST00000248948 ABCF3Q9NUQ8 709 aa12.19□□□□□ -0.46
VPREB3-201ENST00000248948 RUVBL1Q9Y265 456 aaKnown RBP12.19□□□□□ -0.46
VPREB3-201ENST00000248948 CCDC189A1A4V9 331 aa12.18□□□□□ -0.46
VPREB3-201ENST00000248948 H7BY64 318 aa12.18□□□□□ -0.46
VPREB3-201ENST00000248948 IPO13O94829 963 aaKnown RBP12.18□□□□□ -0.46
VPREB3-201ENST00000248948 EIF2S1P05198 315 aaKnown RBP12.18□□□□□ -0.46
VPREB3-201ENST00000248948 CDH1P12830 882 aa12.18□□□□□ -0.46
VPREB3-201ENST00000248948 CD1DP15813 335 aa12.18□□□□□ -0.46
VPREB3-201ENST00000248948 ALAS2P22557 587 aa12.18□□□□□ -0.46
VPREB3-201ENST00000248948 CRABP2P29373 138 aa12.18□□□□□ -0.46
VPREB3-201ENST00000248948 GRK3P35626 688 aa12.18□□□□□ -0.46
VPREB3-201ENST00000248948 CSNK1G2P78368 415 aa12.18□□□□□ -0.46
VPREB3-201ENST00000248948 C19orf57Q0VDD7 668 aa12.18□□□□□ -0.46
VPREB3-201ENST00000248948 DSG2Q14126 1118 aa12.18□□□□□ -0.46
VPREB3-201ENST00000248948 SLC9A5Q14940 896 aa12.18□□□□□ -0.46
VPREB3-201ENST00000248948 ZXDCQ2QGD7 858 aaPredicted RBP12.18□□□□□ -0.46
VPREB3-201ENST00000248948 OVCH1Q7RTY7 1134 aa12.18□□□□□ -0.46
VPREB3-201ENST00000248948 ARHGEF39Q8N4T4 335 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms