RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 DDX39BQ13838 428 aaKnown RBP22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 TCEA2Q15560 299 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 FXNQ16595 210 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 NOXRED1Q6NXP6 359 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 GCNT7Q6ZNI0 430 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 PRR23BQ6ZRT6 265 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 ARPINQ7Z6K5 226 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 TICAM1Q8IUC6 712 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 TMEM126BQ8IUX1 230 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 MSRB3Q8IXL7 192 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 SYNPOQ8N3V7 929 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 OR7G3Q8NG95 312 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 CANT1Q8WVQ1 401 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 C11orf24Q96F05 449 aaPredicted RBP22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 IL17FQ96PD4 163 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 NRTNQ99748 197 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 KCTD14Q9BQ13 255 aaPredicted RBP22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 C1QTNF7Q9BXJ2 289 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 ASF1AQ9Y294 204 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 EML5Q05BV3 1969 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 LRRC72A6NJI9 287 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 ACP5P13686 325 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 MAPKAPK3Q16644 382 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 GRAMD1BQ3KR37 738 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 METRNLQ641Q3 311 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 TMPRSS11BQ86T26 416 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 RIMKLAQ8IXN7 391 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 EBPLQ9BY08 206 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 VCX3BQ9H321 246 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 SLC25A37Q9NYZ2 338 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 VPS29Q9UBQ0 182 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 MOSPD1Q9UJG1 213 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 PLAGL1Q9UM63 463 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 SUFUQ9UMX1 484 aa22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 MRPS17Q9Y2R5 130 aaKnown RBP22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 CFAP20Q9Y6A4 193 aaKnown RBP22.53■■□□□ 1.2
SYNGR3-201ENST00000248121 AQP12BA6NM10 295 aa22.52■■□□□ 1.2
SYNGR3-201ENST00000248121 MAGEB17A8MXT2 336 aa22.52■■□□□ 1.2
SYNGR3-201ENST00000248121 KCNH1O95259 989 aa22.52■■□□□ 1.2
SYNGR3-201ENST00000248121 IGLV3-19P01714 112 aa22.52■■□□□ 1.2
SYNGR3-201ENST00000248121 MTHFD1P11586 935 aaKnown RBP22.52■■□□□ 1.2
SYNGR3-201ENST00000248121 RPL10P27635 214 aaKnown RBP22.52■■□□□ 1.2
SYNGR3-201ENST00000248121 PNLIPRP1P54315 467 aa22.52■■□□□ 1.2
SYNGR3-201ENST00000248121 AQP12AQ8IXF9 295 aa22.52■■□□□ 1.2
SYNGR3-201ENST00000248121 WDR34Q96EX3 536 aa22.52■■□□□ 1.2
SYNGR3-201ENST00000248121 SLC17A4Q9Y2C5 497 aa22.52■■□□□ 1.2
SYNGR3-201ENST00000248121 B3GALT4O96024 378 aa22.51■■□□□ 1.19
SYNGR3-201ENST00000248121 SOX11P35716 441 aa22.51■■□□□ 1.19
SYNGR3-201ENST00000248121 OR4D2P58180 307 aa22.51■■□□□ 1.19
SYNGR3-201ENST00000248121 TSTA3Q13630 321 aaPredicted RBP22.51■■□□□ 1.19
SYNGR3-201ENST00000248121 SF1Q15637 639 aaKnown RBP22.51■■□□□ 1.19
SYNGR3-201ENST00000248121 ASB12Q8WXK4 309 aa22.51■■□□□ 1.19
SYNGR3-201ENST00000248121 LRTOMTQ8WZ04 291 aa22.51■■□□□ 1.19
SYNGR3-201ENST00000248121 TFGQ92734 400 aaPredicted RBP22.51■■□□□ 1.19
SYNGR3-201ENST00000248121 PDXPQ96GD0 296 aa22.51■■□□□ 1.19
SYNGR3-201ENST00000248121 OR52E6Q96RD3 313 aa22.51■■□□□ 1.19
SYNGR3-201ENST00000248121 UHRF1Q96T88 793 aaPredicted RBP22.51■■□□□ 1.19
SYNGR3-201ENST00000248121 PIF1Q9H611 641 aa22.51■■□□□ 1.19
SYNGR3-201ENST00000248121 SERHLQ9NQF3 203 aa22.51■■□□□ 1.19
SYNGR3-201ENST00000248121 SLC6A13Q9NSD5 602 aa22.51■■□□□ 1.19
SYNGR3-201ENST00000248121 THEGQ9P2T0 379 aa22.51■■□□□ 1.19
SYNGR3-201ENST00000248121 KCNK6Q9Y257 313 aa22.51■■□□□ 1.19
SYNGR3-201ENST00000248121 PCDHGA11Q9Y5H2 935 aa22.51■■□□□ 1.19
SYNGR3-201ENST00000248121 NCK1P16333 377 aa22.51■■□□□ 1.19
SYNGR3-201ENST00000248121 HNRNPA2B1P22626 353 aaKnown RBP22.51■■□□□ 1.19
SYNGR3-201ENST00000248121 MAPK1P28482 360 aa22.51■■□□□ 1.19
SYNGR3-201ENST00000248121 HUS1BQ8NHY5 278 aa22.51■■□□□ 1.19
SYNGR3-201ENST00000248121 GPR174Q9BXC1 333 aa22.51■■□□□ 1.19
SYNGR3-201ENST00000248121 IKZF5Q9H5V7 419 aa22.51■■□□□ 1.19
SYNGR3-201ENST00000248121 BRF2Q9HAW0 419 aa22.51■■□□□ 1.19
SYNGR3-201ENST00000248121 INVSQ9Y283 1065 aa22.51■■□□□ 1.19
SYNGR3-201ENST00000248121 DTNAQ9Y4J8 743 aa22.51■■□□□ 1.19
SYNGR3-201ENST00000248121 SNX13Q9Y5W8 968 aa22.51■■□□□ 1.19
SYNGR3-201ENST00000248121 DNMT3AQ9Y6K1 912 aaPredicted RBP22.51■■□□□ 1.19
SYNGR3-201ENST00000248121 LRATO95237 230 aa22.5■■□□□ 1.19
SYNGR3-201ENST00000248121 STAMBPO95630 424 aa22.5■■□□□ 1.19
SYNGR3-201ENST00000248121 HTR1EP28566 365 aa22.5■■□□□ 1.19
SYNGR3-201ENST00000248121 HMBOX1Q6NT76 420 aa22.5■■□□□ 1.19
SYNGR3-201ENST00000248121 OR8J3Q8NGG0 315 aa22.5■■□□□ 1.19
SYNGR3-201ENST00000248121 TESCQ96BS2 214 aa22.5■■□□□ 1.19
SYNGR3-201ENST00000248121 SPNS1Q9H2V7 528 aa22.5■■□□□ 1.19
SYNGR3-201ENST00000248121 CCM2LQ9NUG4 571 aaPredicted RBP22.5■■□□□ 1.19
SYNGR3-201ENST00000248121 GEMIN8Q9NWZ8 242 aaKnown RBP22.5■■□□□ 1.19
SYNGR3-201ENST00000248121 WSB2Q9NYS7 404 aaPredicted RBP22.5■■□□□ 1.19
SYNGR3-201ENST00000248121 WDR37Q9Y2I8 494 aa22.5■■□□□ 1.19
SYNGR3-201ENST00000248121 GON4LQ3T8J9 2241 aa22.5■■□□□ 1.19
SYNGR3-201ENST00000248121 TRBV5-3A0A0A0MS03 114 aa22.5■■□□□ 1.19
SYNGR3-201ENST00000248121 TCRBV5S2A0A599 114 aa22.5■■□□□ 1.19
SYNGR3-201ENST00000248121 EIF4E1BA6NMX2 242 aaKnown RBP22.5■■□□□ 1.19
SYNGR3-201ENST00000248121 STK25O00506 426 aa22.5■■□□□ 1.19
SYNGR3-201ENST00000248121 KMOO15229 486 aa22.5■■□□□ 1.19
SYNGR3-201ENST00000248121 DCNP07585 359 aaKnown RBP22.5■■□□□ 1.19
SYNGR3-201ENST00000248121 HSD3B1P14060 373 aa22.5■■□□□ 1.19
SYNGR3-201ENST00000248121 HRH2P25021 359 aa22.5■■□□□ 1.19
SYNGR3-201ENST00000248121 HSD3B2P26439 372 aa22.5■■□□□ 1.19
SYNGR3-201ENST00000248121 CLNS1AP54105 237 aaKnown RBP22.5■■□□□ 1.19
SYNGR3-201ENST00000248121 SFSWAPQ12872 951 aaKnown RBP22.5■■□□□ 1.19
SYNGR3-201ENST00000248121 GTDC1Q4AE62 458 aa22.5■■□□□ 1.19
SYNGR3-201ENST00000248121 PYCR3Q53H96 274 aa22.5■■□□□ 1.19
SYNGR3-201ENST00000248121 IRAK1BP1Q5VVH5 260 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms