RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 OAS3Q9Y6K5 1087 aaKnown RBP8.39□□□□□ -1.07
VPS4B-201ENST00000238497 FREM2Q5SZK8 3169 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 PLXND1Q9Y4D7 1925 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 DSPP15924 2871 aaKnown RBP8.39□□□□□ -1.07
VPS4B-201ENST00000238497 CFAP47Q6ZTR5 3102 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 MAGEA13PA6NCF6 341 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 NME4O00746 187 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 TNFSF14O43557 240 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 PCDHGA12O60330 932 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 STK16O75716 305 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 CPSF4O95639 269 aaKnown RBP8.39□□□□□ -1.07
VPS4B-201ENST00000238497 TSPAN12O95859 305 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 B3GALT4O96024 378 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 NTRK1P04629 796 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 ANXA5P08758 320 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 ZNF883P0CG24 379 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 C6P13671 934 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 CTSEP14091 401 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 GPX3P22352 226 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 PRDX6P30041 224 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 CCR7P32248 378 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 CLCN7P51798 805 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 POLR2LP62875 67 aaKnown RBP8.39□□□□□ -1.07
VPS4B-201ENST00000238497 PTSQ03393 145 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 ACVR1Q04771 509 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 PRKG2Q13237 762 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 PDK3Q15120 406 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 FAM174BQ3ZCQ3 159 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 AAGABQ6PD74 315 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 ENPP7Q6UWV6 458 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 SYTL1Q8IYJ3 562 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 SFRP1Q8N474 314 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 RHEBL1Q8TAI7 183 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 TADA1Q96BN2 335 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 LRRC58Q96CX6 371 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 APOLD1Q96LR9 279 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 PARVBQ9HBI1 364 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 SPATS2LQ9NUQ6 558 aaKnown RBP8.39□□□□□ -1.07
VPS4B-201ENST00000238497 GULP1Q9UBP9 304 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 VPS4AQ9UN37 437 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 OR1A2Q9Y585 309 aa8.39□□□□□ -1.07
VPS4B-201ENST00000238497 SAP18O00422 153 aaKnown RBP8.38□□□□□ -1.07
VPS4B-201ENST00000238497 ALPPL2P10696 532 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 IDO1P14902 403 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 IL10P22301 178 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 ACRV1P26436 265 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 RABIFP47224 123 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 TPD52P55327 224 aaPredicted RBP8.38□□□□□ -1.07
VPS4B-201ENST00000238497 HNRNPKP61978 463 aaKnown RBP eCLIP8.38□□□□□ -1.07
VPS4B-201ENST00000238497 LIPEQ05469 1076 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 BIRC2Q13490 618 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 NAE1Q13564 534 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 DEFB133Q30KQ1 61 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 PTCHD3Q3KNS1 767 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 IRGCQ6NXR0 463 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 FAM180BQ6P0A1 224 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 BRAT1Q6PJG6 821 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 CERS6Q6ZMG9 384 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 HSD11B1LQ7Z5J1 315 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 KLHDC8BQ8IXV7 354 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 PHACTR4Q8IZ21 702 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 TMEM145Q8NBT3 493 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 SAP25Q8TEE9 199 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 BMFQ96LC9 184 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 MBNL1Q9NR56 388 aaKnown RBP8.38□□□□□ -1.07
VPS4B-201ENST00000238497 MAP10Q9P2G4 905 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 SUFUQ9UMX1 484 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 U3KQV3 271 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 MYLKQ15746 1914 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 TMEM202A6NGA9 273 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 H3BM21 787 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 E2F3O00716 465 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 SIGLEC6O43699 453 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 OTCP00480 354 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 ZNF23P17027 643 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 LRP8Q14114 963 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 ANKRD26P1Q6NSI1 321 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 IQCHQ86VS3 1027 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 PLPP6Q8IY26 295 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 SLC15A3Q8IY34 581 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 LIX1Q8N485 282 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 TSACCQ96A04 125 aaPredicted RBP8.38□□□□□ -1.07
VPS4B-201ENST00000238497 TMEM159Q96B96 161 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 AP2M1Q96CW1 435 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 NMD3Q96D46 503 aaKnown RBP8.38□□□□□ -1.07
VPS4B-201ENST00000238497 TMEM79Q9BSE2 394 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 BATF3Q9NR55 127 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 APOBEC3BQ9UH17 382 aaKnown RBP8.38□□□□□ -1.07
VPS4B-201ENST00000238497 TDRKHQ9Y2W6 561 aaKnown RBP8.38□□□□□ -1.07
VPS4B-201ENST00000238497 ASPMQ8IZT6 3477 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 CROCCQ5TZA2 2017 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 CHD6Q8TD26 2715 aa8.38□□□□□ -1.07
VPS4B-201ENST00000238497 CFAP99D6REC4 459 aa8.37□□□□□ -1.07
VPS4B-201ENST00000238497 H3BNX3 289 aa8.37□□□□□ -1.07
VPS4B-201ENST00000238497 AREL1O15033 823 aa8.37□□□□□ -1.07
VPS4B-201ENST00000238497 YKT6O15498 198 aa8.37□□□□□ -1.07
VPS4B-201ENST00000238497 SERPIND1P05546 499 aa8.37□□□□□ -1.07
VPS4B-201ENST00000238497 UQCRBP14927 111 aa8.37□□□□□ -1.07
VPS4B-201ENST00000238497 ATP6V1B2P21281 511 aa8.37□□□□□ -1.07
VPS4B-201ENST00000238497 HTR1BP28222 390 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms