RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 LOC730098B7Z3J9 87 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 LOC110117498-PIK3R3F6TDL0 507 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 K7ERQ8 282 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 ERVH48-1M5A8F1 160 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 PRMT5O14744 637 aaPredicted RBP9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 OTCP00480 354 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 SERPINA1P01009 418 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 TP53P04637 393 aaPredicted RBP9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 LCKP06239 509 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 RPL17P18621 184 aaKnown RBP9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 PSMA3P25788 255 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 GKP32189 559 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 ATP5C1P36542 298 aaKnown RBP9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 AGAP6Q5VW22 663 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 PTRHD1Q6GMV3 140 aaKnown RBP9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 LAIR1Q6GTX8 287 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 MAMSTRQ6ZN01 415 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 SLC24A5Q71RS6 500 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 GALNT10Q86SR1 603 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 SERPINA9Q86WD7 417 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 RHOXF1Q8NHV9 184 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 AGAP4Q96P64 663 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 NEDD4LQ96PU5 975 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 OR52E6Q96RD3 313 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 CHCHD6Q9BRQ6 235 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 COPS4Q9BT78 406 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 GPR63Q9BZJ6 419 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 MMP28Q9H239 520 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 ZNF490Q9ULM2 529 aaPredicted RBP9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 VPS9D1Q9Y2B5 631 aa9.14□□□□□ -0.95
HLA-DOA-201ENST00000229829 KIAA1549LQ6ZVL6 1849 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 SLC38A8A6NNN8 435 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 POM121CA8CG34 1229 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 SLC1A7O00341 560 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 SLC22A1O15245 554 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 NUPL2O15504 423 aaKnown RBP9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 SLC25A14O95258 325 aaPredicted RBP9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 PCMT1P22061 227 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 CCND3P30281 292 aaPredicted RBP9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 AKT1P31749 480 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 EIF2DP41214 584 aaKnown RBP9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 OR3A3P47888 321 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 EMX1Q04741 257 aaPredicted RBP9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 ZNF177Q13360 481 aaPredicted RBP9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 RAPSNQ13702 412 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 TUBA3CQ13748 450 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 CTF1Q16619 201 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 SMN1Q16637 294 aaKnown RBP9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 BCL7AQ4VC05 210 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 CCDC115Q96NT0 180 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 INPP5KQ9BT40 448 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 ADGRE3Q9BY15 652 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 TM6SF2Q9BZW4 377 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 FKBP14Q9NWM8 211 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 DNMT3LQ9UJW3 386 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 EIF3LQ9Y262 564 aaKnown RBP9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 GRXCR2A6NFK2 248 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 HNRNPCL2B2RXH8 293 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 TMEM189-UBE2V1I3L0A0 370 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 GAPDHSO14556 408 aaPredicted RBP9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 INPPL1O15357 1258 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 COCHO43405 550 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 CREG1O75629 220 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 DIRAS1O95057 198 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 CORO1AP31146 461 aaKnown RBP9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 TAGLNQ01995 201 aaKnown RBP9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 GPR17Q13304 367 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 SLC14A1Q13336 389 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 CDK10Q15131 360 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 RUNDC3AQ59EK9 446 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 CXorf57Q6NSI4 855 aaKnown RBP9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 GDPD3Q7L5L3 318 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 ZNF551Q7Z340 670 aaPredicted RBP9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 ZNF438Q7Z4V0 828 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 ADAMTSL2Q86TH1 951 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 CHPFQ8IZ52 775 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 PJA1Q8NG27 643 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 PPP3R2Q96LZ3 170 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 MKRN2Q9H000 416 aaKnown RBP9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 CRISPLD2Q9H0B8 497 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 RNF167Q9H6Y7 350 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 KAT8Q9H7Z6 458 aaKnown RBP9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 TAS2R9Q9NYW1 312 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 DLGAP4Q9Y2H0 992 aa9.13□□□□□ -0.95
HLA-DOA-201ENST00000229829 UPK3BL1B0FP48 263 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 UPK3BL2E5RIL1 263 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 SYN3O14994 580 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 AIREO43918 545 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 ULK1O75385 1050 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 TPPPO94811 219 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 WDR47O94967 919 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 PRAMEF1O95521 474 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 ALDH1A1P00352 501 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 HPRP00739 348 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 KRT6AP02538 564 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 MT-ND2P03891 347 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 KRT6BP04259 564 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 PSKH1P11801 424 aa9.12□□□□□ -0.95
HLA-DOA-201ENST00000229829 CKBP12277 381 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms