RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 ZNF557Q8N988 423 aaPredicted RBP5.55□□□□□ -1.52
RFX4-201ENST00000229387 TTC16Q8NEE8 873 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 JOSD2Q8TAC2 188 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 RNF139Q8WU17 664 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 REPS1Q96D71 796 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 PIWIL1Q96J94 861 aaKnown RBP5.55□□□□□ -1.52
RFX4-201ENST00000229387 PAFAH2Q99487 392 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 DUSP26Q9BV47 211 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 ALOXE3Q9BYJ1 711 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 TOR3AQ9H497 397 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 HEXA-AS1Q9H8Q6 139 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 GLOD4Q9HC38 313 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 NIT2Q9NQR4 276 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 NRBP2Q9NSY0 501 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 FAM49BQ9NUQ9 324 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 GPATCH2LQ9NWQ4 482 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 SPHK1Q9NYA1 384 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 COX16Q9P0S2 106 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 SH3BP4Q9P0V3 963 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 UBQLN2Q9UHD9 624 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 MID2Q9UJV3 735 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 DNPEPQ9ULA0 475 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 HTTP42858 3142 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 QSER1Q2KHR3 1735 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 ZNF195O14628 629 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 LYPLA1O75608 230 aaPredicted RBP5.55□□□□□ -1.52
RFX4-201ENST00000229387 CBR3O75828 277 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 ASGR1P07306 291 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 ACSM4P0C7M7 580 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 INSRRP14616 1297 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 ACO1P21399 889 aaKnown RBP5.55□□□□□ -1.52
RFX4-201ENST00000229387 CPN2P22792 545 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 ADORA2AP29274 412 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 PDHA2P29803 388 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 GIPRP48546 466 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 ARPP19P56211 112 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 NOMO3P69849 1222 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 ZNF699Q32M78 642 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 RNF212Q495C1 297 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 KLHL26Q53HC5 615 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 COLEC12Q5KU26 742 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 LIN9Q5TKA1 542 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 DENND5AQ6IQ26 1287 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 SCYL2Q6P3W7 929 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 CDKL3Q8IVW4 592 aaPredicted RBP5.55□□□□□ -1.52
RFX4-201ENST00000229387 THEM5Q8N1Q8 247 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 CBR4Q8N4T8 237 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 C7orf31Q8N865 590 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 RNASE11Q8TAA1 199 aaKnown RBP5.55□□□□□ -1.52
RFX4-201ENST00000229387 USP13Q92995 863 aaPredicted RBP5.55□□□□□ -1.52
RFX4-201ENST00000229387 SLC45A3Q96JT2 553 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 TCF25Q9BQ70 676 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.55□□□□□ -1.52
RFX4-201ENST00000229387 OLA1Q9NTK5 396 aaKnown RBP5.55□□□□□ -1.52
RFX4-201ENST00000229387 SMPD3Q9NY59 655 aaPredicted RBP5.55□□□□□ -1.52
RFX4-201ENST00000229387 TREM2Q9NZC2 230 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 RAPGEFL1Q9UHV5 662 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 ZNF112Q9UJU3 913 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 MGAT4BQ9UQ53 548 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 PEX16Q9Y5Y5 336 aa5.55□□□□□ -1.52
RFX4-201ENST00000229387 ANKDD1BA6NHY2 528 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 TMEM210A6NLX4 147 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 CLDN24A6NM45 220 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 COPEO14579 308 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 SCAMP1O15126 338 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 GPR39O43194 453 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 IL33O95760 270 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 DNTTP04053 509 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 ASGR2P07307 311 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 TFE3P19532 575 aaPredicted RBP5.54□□□□□ -1.52
RFX4-201ENST00000229387 OGNP20774 298 aaKnown RBP5.54□□□□□ -1.52
RFX4-201ENST00000229387 PTBP1P26599 531 aaKnown RBP eCLIP5.54□□□□□ -1.52
RFX4-201ENST00000229387 MAN2A2P49641 1150 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 NUDT2P50583 147 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 BCAT1P54687 386 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 CASP6P55212 293 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 PURAQ00577 322 aaKnown RBP5.54□□□□□ -1.52
RFX4-201ENST00000229387 PTPRRQ15256 657 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 CHI3L2Q15782 390 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 TMEM31Q5JXX7 168 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 TPRG1LQ5T0D9 272 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 PDZK1Q5T2W1 519 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 LIN54Q6MZP7 749 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 EPHX4Q8IUS5 362 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 ABRAQ8N0Z2 381 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 POC1BQ8TC44 478 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 FBXL20Q96IG2 436 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 AGAP2Q99490 1192 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 MMP19Q99542 508 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 PKP4Q99569 1192 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 VRK1Q99986 396 aaPredicted RBP5.54□□□□□ -1.52
RFX4-201ENST00000229387 PDCD10Q9BUL8 212 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 TTLL2Q9BWV7 592 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 C1QTNF1Q9BXJ1 281 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 ANKRD19PQ9H560 264 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 ELOVL6Q9H5J4 265 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 SYNDIG1Q9H7V2 258 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 ADAM30Q9UKF2 790 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 MGAT4AQ9UM21 535 aa5.54□□□□□ -1.52
RFX4-201ENST00000229387 DHRS7Q9Y394 339 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms