RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 CYP2A7P20853 494 aa15.77■□□□□ 0.12
LTBR-201ENST00000228918 HOXA9P31269 272 aa15.77■□□□□ 0.12
LTBR-201ENST00000228918 KDELR2P33947 212 aa15.77■□□□□ 0.12
LTBR-201ENST00000228918 MAP2K4P45985 399 aa15.77■□□□□ 0.12
LTBR-201ENST00000228918 MASP1P48740 699 aa15.77■□□□□ 0.12
LTBR-201ENST00000228918 AP1S2P56377 157 aa15.77■□□□□ 0.12
LTBR-201ENST00000228918 CYP4F8P98187 520 aa15.77■□□□□ 0.12
LTBR-201ENST00000228918 SRSF11Q05519 484 aaKnown RBP15.77■□□□□ 0.12
LTBR-201ENST00000228918 PLEKHS1Q5SXH7 462 aa15.77■□□□□ 0.12
LTBR-201ENST00000228918 BTLAQ7Z6A9 289 aa15.77■□□□□ 0.12
LTBR-201ENST00000228918 HORMAD1Q86X24 394 aa15.77■□□□□ 0.12
LTBR-201ENST00000228918 HSH2DQ96JZ2 352 aa15.77■□□□□ 0.12
LTBR-201ENST00000228918 MAGEB10Q96LZ2 347 aaPredicted RBP15.77■□□□□ 0.12
LTBR-201ENST00000228918 APOL4Q9BPW4 351 aa15.77■□□□□ 0.12
LTBR-201ENST00000228918 PDP1Q9P0J1 537 aaPredicted RBP15.77■□□□□ 0.12
LTBR-201ENST00000228918 NDRG4Q9ULP0 352 aaKnown RBP15.77■□□□□ 0.12
LTBR-201ENST00000228918 MAGEB17A8MXT2 336 aa15.77■□□□□ 0.11
LTBR-201ENST00000228918 BNIP3LO60238 219 aa15.77■□□□□ 0.11
LTBR-201ENST00000228918 JRKO75564 520 aa15.77■□□□□ 0.11
LTBR-201ENST00000228918 INHAP05111 366 aa15.77■□□□□ 0.11
LTBR-201ENST00000228918 PFN3P60673 137 aa15.77■□□□□ 0.11
LTBR-201ENST00000228918 CSTF3Q12996 717 aaKnown RBP15.77■□□□□ 0.11
LTBR-201ENST00000228918 C22orf39Q6P5X5 142 aa15.77■□□□□ 0.11
LTBR-201ENST00000228918 SERPINA13PQ6UXR4 307 aa15.77■□□□□ 0.11
LTBR-201ENST00000228918 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.77■□□□□ 0.11
LTBR-201ENST00000228918 LINC00299Q6ZSB3 139 aa15.77■□□□□ 0.11
LTBR-201ENST00000228918 CBLL1Q75N03 491 aa15.77■□□□□ 0.11
LTBR-201ENST00000228918 EIF3MQ7L2H7 374 aaKnown RBP15.77■□□□□ 0.11
LTBR-201ENST00000228918 SLCO6A1Q86UG4 719 aa15.77■□□□□ 0.11
LTBR-201ENST00000228918 TCEAL8Q8IYN2 117 aa15.77■□□□□ 0.11
LTBR-201ENST00000228918 TTC29Q8NA56 475 aaPredicted RBP15.77■□□□□ 0.11
LTBR-201ENST00000228918 RAET1EQ8TD07 263 aa15.77■□□□□ 0.11
LTBR-201ENST00000228918 VMP1Q96GC9 406 aa15.77■□□□□ 0.11
LTBR-201ENST00000228918 ATG10Q9H0Y0 220 aa15.77■□□□□ 0.11
LTBR-201ENST00000228918 RMI1Q9H9A7 625 aa15.77■□□□□ 0.11
LTBR-201ENST00000228918 HMG20AQ9NP66 347 aa15.77■□□□□ 0.11
LTBR-201ENST00000228918 NECTIN3Q9NQS3 549 aa15.77■□□□□ 0.11
LTBR-201ENST00000228918 FAM120CQ9NX05 1096 aaKnown RBP15.77■□□□□ 0.11
LTBR-201ENST00000228918 SCN3BQ9NY72 215 aa15.77■□□□□ 0.11
LTBR-201ENST00000228918 CFAP97Q9P2B7 532 aa15.77■□□□□ 0.11
LTBR-201ENST00000228918 ERVK-11Q9UQG0 969 aa15.77■□□□□ 0.11
LTBR-201ENST00000228918 ATP1B2P14415 290 aaPredicted RBP15.76■□□□□ 0.11
LTBR-201ENST00000228918 CD22P20273 847 aa15.76■□□□□ 0.11
LTBR-201ENST00000228918 SPINT3P49223 89 aa15.76■□□□□ 0.11
LTBR-201ENST00000228918 ITGA1P56199 1179 aa15.76■□□□□ 0.11
LTBR-201ENST00000228918 MAD2L1BPQ15013 274 aaPredicted RBP15.76■□□□□ 0.11
LTBR-201ENST00000228918 ADPRMQ3LIE5 342 aa15.76■□□□□ 0.11
LTBR-201ENST00000228918 SYT6Q5T7P8 510 aaPredicted RBP15.76■□□□□ 0.11
LTBR-201ENST00000228918 EGFLAMQ63HQ2 1017 aa15.76■□□□□ 0.11
LTBR-201ENST00000228918 TMEM53Q6P2H8 277 aa15.76■□□□□ 0.11
LTBR-201ENST00000228918 ZNF621Q6ZSS3 439 aa15.76■□□□□ 0.11
LTBR-201ENST00000228918 HTR3DQ70Z44 454 aa15.76■□□□□ 0.11
LTBR-201ENST00000228918 CPA6Q8N4T0 437 aa15.76■□□□□ 0.11
LTBR-201ENST00000228918 OR8J2Q8NGG1 315 aa15.76■□□□□ 0.11
LTBR-201ENST00000228918 RHNO1Q9BSD3 238 aa15.76■□□□□ 0.11
LTBR-201ENST00000228918 WDR12Q9GZL7 423 aaKnown RBP15.76■□□□□ 0.11
LTBR-201ENST00000228918 SAMHD1Q9Y3Z3 626 aaKnown RBP15.76■□□□□ 0.11
LTBR-201ENST00000228918 MT-ND2P03891 347 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 CKMP06732 381 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 COX7A2P14406 83 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 GJA8P48165 433 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 ZDHHC20Q5W0Z9 365 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 CLECL1Q8IZS7 167 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 NDNFQ8TB73 568 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 CD99L2Q8TCZ2 262 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 LMLNQ96KR4 655 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 ZNF300Q96RE9 604 aaPredicted RBP15.75■□□□□ 0.11
LTBR-201ENST00000228918 MYOCQ99972 504 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 DPH2Q9BQC3 489 aaPredicted RBP15.75■□□□□ 0.11
LTBR-201ENST00000228918 HERC2P3Q9BVR0 1158 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 MRPL17Q9NRX2 175 aaKnown RBP15.75■□□□□ 0.11
LTBR-201ENST00000228918 B4GALT6Q9UBX8 382 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 HS3ST2Q9Y278 367 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 UGDHO60701 494 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 EPHA2P29317 976 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 RXRGP48443 463 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 C21orf58P58505 322 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 CLCA4Q14CN2 919 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 SMN1Q16637 294 aaKnown RBP15.75■□□□□ 0.11
LTBR-201ENST00000228918 LRRC73Q5JTD7 316 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 KIAA1614Q5VZ46 1190 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 LIPJQ5W064 366 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 CCDC81Q6ZN84 652 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 P2RY8Q86VZ1 359 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 RASGRP3Q8IV61 690 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 WDR20Q8TBZ3 569 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 PXYLP1Q8TE99 480 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 AUTS2Q8WXX7 1259 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 PITX2Q99697 317 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 BBS2Q9BXC9 721 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 ZDHHC6Q9H6R6 413 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 HMX1Q9NP08 348 aaPredicted RBP15.75■□□□□ 0.11
LTBR-201ENST00000228918 KRT84Q9NSB2 600 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 KIF17Q9P2E2 1029 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 CD84Q9UIB8 345 aa15.75■□□□□ 0.11
LTBR-201ENST00000228918 UPK3BL1B0FP48 263 aa15.74■□□□□ 0.11
LTBR-201ENST00000228918 UPK3BL2E5RIL1 263 aa15.74■□□□□ 0.11
LTBR-201ENST00000228918 TOR1BO14657 336 aa15.74■□□□□ 0.11
LTBR-201ENST00000228918 YY2O15391 372 aa15.74■□□□□ 0.11
LTBR-201ENST00000228918 RGS10O43665 173 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms