RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 UGT8Q16880 541 aa12.02□□□□□ -0.49
NUP88-201ENST00000225696 TTLL9Q3SXZ7 439 aa12.02□□□□□ -0.49
NUP88-201ENST00000225696 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.02□□□□□ -0.49
NUP88-201ENST00000225696 NEK5Q6P3R8 708 aa12.02□□□□□ -0.49
NUP88-201ENST00000225696 CCBE1Q6UXH8 406 aaPredicted RBP12.02□□□□□ -0.49
NUP88-201ENST00000225696 CYP2U1Q7Z449 544 aa12.02□□□□□ -0.49
NUP88-201ENST00000225696 PIH1D2Q8WWB5 315 aa12.02□□□□□ -0.49
NUP88-201ENST00000225696 HRASLS5Q96KN8 279 aa12.02□□□□□ -0.49
NUP88-201ENST00000225696 HHIPQ96QV1 700 aa12.02□□□□□ -0.49
NUP88-201ENST00000225696 NACA2Q9H009 215 aa12.02□□□□□ -0.49
NUP88-201ENST00000225696 CCNB1IP1Q9NPC3 277 aa12.02□□□□□ -0.49
NUP88-201ENST00000225696 C14orf119Q9NWQ9 140 aa12.02□□□□□ -0.49
NUP88-201ENST00000225696 SPATA7Q9P0W8 599 aa12.02□□□□□ -0.49
NUP88-201ENST00000225696 PSORS1C1Q9UIG5 152 aa12.02□□□□□ -0.49
NUP88-201ENST00000225696 KCNE1BA0A087WTH5 132 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 AP3D1O14617 1153 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 KMOO15229 486 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 ADAM12O43184 909 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 COCHO43405 550 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 SH3BGRLO75368 114 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 ACPPP15309 386 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 BPIP17213 487 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 CTGFP29279 349 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 ATP5C1P36542 298 aaKnown RBP12.01□□□□□ -0.49
NUP88-201ENST00000225696 GATMP50440 423 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 MRPL58Q14197 206 aaKnown RBP12.01□□□□□ -0.49
NUP88-201ENST00000225696 ZNF181Q2M3W8 571 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.01□□□□□ -0.49
NUP88-201ENST00000225696 CBLL1Q75N03 491 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 TAS1R1Q7RTX1 841 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 GALNT13Q8IUC8 556 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 RBFAQ8N0V3 343 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 OR52J3Q8NH60 311 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 CDC26Q8NHZ8 85 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 UBTD2Q8WUN7 234 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 TESCQ96BS2 214 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 CEP295NLQ96MC4 621 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 FEVQ99581 238 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 SDHCQ99643 169 aaPredicted RBP12.01□□□□□ -0.49
NUP88-201ENST00000225696 CHCHD6Q9BRQ6 235 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 RNF38Q9H0F5 515 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 ELOVL6Q9H5J4 265 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 REEP1Q9H902 201 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 ARL15Q9NXU5 204 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 DNMT3LQ9UJW3 386 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 SNX6Q9UNH7 406 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 IFT52Q9Y366 437 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 ISPDA4D126 451 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 SLC38A8A6NNN8 435 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 EVPLLA8MZ36 301 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 FAM47E-STBD1D6RA91 191 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 SMAD6O43541 496 aaKnown RBP12.01□□□□□ -0.49
NUP88-201ENST00000225696 GCM2O75603 506 aaPredicted RBP12.01□□□□□ -0.49
NUP88-201ENST00000225696 KRT6AP02538 564 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 KRT6BP04259 564 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 ACRV1P26436 265 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 RRM2P31350 389 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 KIR3DL1P43629 444 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 KRT6CP48668 564 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 RPIAP49247 311 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 SLC11A2P49281 568 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 ITGA1P56199 1179 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 COPZ1P61923 177 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 KCNJ10P78508 379 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 CYP27C1Q4G0S4 372 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 RTP2Q5QGT7 225 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 ARMC12Q5T9G4 340 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 NOXRED1Q6NXP6 359 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 CERS6Q6ZMG9 384 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 RNF165Q6ZSG1 346 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 RFLNAQ6ZTI6 216 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 GPR155Q7Z3F1 870 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 SLC46A3Q7Z3Q1 461 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 TSPAN33Q86UF1 283 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 DNAJC22Q8N4W6 341 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 WFDC5Q8TCV5 224 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 IPCEF1Q8WWN9 437 aaPredicted RBP12.01□□□□□ -0.49
NUP88-201ENST00000225696 TP53INP1Q96A56 240 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 ZNF486Q96H40 463 aaPredicted RBP12.01□□□□□ -0.49
NUP88-201ENST00000225696 FBXL12Q9NXK8 326 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 GABRQQ9UN88 632 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 AP3M1Q9Y2T2 418 aa12.01□□□□□ -0.49
NUP88-201ENST00000225696 TAF4O00268 1085 aa12□□□□□ -0.49
NUP88-201ENST00000225696 ASNA1O43681 348 aa12□□□□□ -0.49
NUP88-201ENST00000225696 STC2O76061 302 aa12□□□□□ -0.49
NUP88-201ENST00000225696 OPN1SWP03999 348 aa12□□□□□ -0.49
NUP88-201ENST00000225696 ASGR1P07306 291 aa12□□□□□ -0.49
NUP88-201ENST00000225696 HSMCR30P0CW71 290 aa12□□□□□ -0.49
NUP88-201ENST00000225696 LAMP1P11279 417 aa12□□□□□ -0.49
NUP88-201ENST00000225696 AMD1P17707 334 aa12□□□□□ -0.49
NUP88-201ENST00000225696 GPX2P18283 190 aa12□□□□□ -0.49
NUP88-201ENST00000225696 RPS3P23396 243 aaKnown RBP eCLIP12□□□□□ -0.49
NUP88-201ENST00000225696 ITPKAP23677 461 aa12□□□□□ -0.49
NUP88-201ENST00000225696 UGT2B10P36537 528 aa12□□□□□ -0.49
NUP88-201ENST00000225696 IDH2P48735 452 aaKnown RBP12□□□□□ -0.49
NUP88-201ENST00000225696 LIMK1P53667 647 aa12□□□□□ -0.49
NUP88-201ENST00000225696 RHOAP61586 193 aa12□□□□□ -0.49
NUP88-201ENST00000225696 TUBA1BP68363 451 aa12□□□□□ -0.49
NUP88-201ENST00000225696 MBTPS1Q14703 1052 aa12□□□□□ -0.49
NUP88-201ENST00000225696 DUOXA1Q1HG43 343 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms