RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 FHP07954 510 aa17.94■□□□□ 0.46
CLIP2-201ENST00000223398 NTSR1P30989 418 aa17.94■□□□□ 0.46
CLIP2-201ENST00000223398 FOXN2P32314 431 aa17.94■□□□□ 0.46
CLIP2-201ENST00000223398 GDI2P50395 445 aaKnown RBP17.94■□□□□ 0.46
CLIP2-201ENST00000223398 ELAVL3Q14576 367 aaKnown RBP17.94■□□□□ 0.46
CLIP2-201ENST00000223398 GPR153Q6NV75 609 aa17.94■□□□□ 0.46
CLIP2-201ENST00000223398 TLCD1Q96CP7 247 aa17.94■□□□□ 0.46
CLIP2-201ENST00000223398 MS4A4AQ96JQ5 239 aa17.94■□□□□ 0.46
CLIP2-201ENST00000223398 HIST1H2AAQ96QV6 131 aa17.94■□□□□ 0.46
CLIP2-201ENST00000223398 HAPLN2Q9GZV7 340 aa17.94■□□□□ 0.46
CLIP2-201ENST00000223398 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.94■□□□□ 0.466e-7■■■□□ 16.9
CLIP2-201ENST00000223398 LINC00597Q9H2U6 94 aa17.94■□□□□ 0.46
CLIP2-201ENST00000223398 RGS10O43665 173 aa17.94■□□□□ 0.46
CLIP2-201ENST00000223398 PLOD3O60568 738 aa17.94■□□□□ 0.46
CLIP2-201ENST00000223398 ANGPTL1O95841 491 aa17.94■□□□□ 0.46
CLIP2-201ENST00000223398 OXR1Q8N573 874 aa17.94■□□□□ 0.46
CLIP2-201ENST00000223398 PHOSPHO1Q8TCT1 267 aa17.94■□□□□ 0.46
CLIP2-201ENST00000223398 FAM3CQ92520 227 aa17.94■□□□□ 0.46
CLIP2-201ENST00000223398 PCDHAC1Q9H158 963 aa17.94■□□□□ 0.46
CLIP2-201ENST00000223398 SMPD3Q9NY59 655 aaPredicted RBP17.94■□□□□ 0.46
CLIP2-201ENST00000223398 CAPN14A8MX76 684 aa17.94■□□□□ 0.46
CLIP2-201ENST00000223398 TNFRSF21O75509 655 aa17.94■□□□□ 0.46
CLIP2-201ENST00000223398 PTNP21246 168 aa17.94■□□□□ 0.46
CLIP2-201ENST00000223398 RAB33AQ14088 237 aa17.94■□□□□ 0.46
CLIP2-201ENST00000223398 LIN54Q6MZP7 749 aa17.94■□□□□ 0.46
CLIP2-201ENST00000223398 CHRDL2Q6WN34 429 aa17.94■□□□□ 0.46
CLIP2-201ENST00000223398 POC5Q8NA72 575 aa17.94■□□□□ 0.46
CLIP2-201ENST00000223398 GRXCR1A8MXD5 290 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 CHST10O43529 356 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 DNAJA2O60884 412 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 AGTR2P50052 363 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 WDR5P61964 334 aaKnown RBP17.93■□□□□ 0.46
CLIP2-201ENST00000223398 ZNF267Q14586 743 aaPredicted RBP17.93■□□□□ 0.46
CLIP2-201ENST00000223398 CST6Q15828 149 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 FAM92BQ6ZTR7 304 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 GALNTL5Q7Z4T8 443 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 CAND1Q86VP6 1230 aaKnown RBP17.93■□□□□ 0.46
CLIP2-201ENST00000223398 SETD6Q8TBK2 473 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 THAP3Q8WTV1 239 aaPredicted RBP17.93■□□□□ 0.46
CLIP2-201ENST00000223398 RIT1Q92963 219 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 NKD1Q969G9 470 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 COMMD9Q9P000 198 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 ARFGEF2Q9Y6D5 1785 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 VLDLRP98155 873 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 CCDC92Q53HC0 331 aaPredicted RBP17.93■□□□□ 0.46
CLIP2-201ENST00000223398 WDTC1Q8N5D0 677 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 SLC39A3Q9BRY0 314 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 CHMP1AQ9HD42 196 aaPredicted RBP17.93■□□□□ 0.46
CLIP2-201ENST00000223398 TMEM59LQ9UK28 342 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 DUSP3P51452 185 aaPredicted RBP17.93■□□□□ 0.46
CLIP2-201ENST00000223398 TGFBIQ15582 683 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 TICAM1Q8IUC6 712 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 UBE2J2Q8N2K1 259 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 DERL2Q9GZP9 239 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 MTG2Q9H4K7 406 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 VRTNQ9H8Y1 702 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 CD207Q9UJ71 328 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 OR1A2Q9Y585 309 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 IRAK3Q9Y616 596 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 C2orf74A8MZ97 194 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 PRODHO43272 600 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 PRAMEF12O95522 483 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 RENP00797 406 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 SHMT2P34897 504 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 IL12RB1P42701 662 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 ACSBG2Q5FVE4 666 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 SLC2A7Q6PXP3 512 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 PMM1Q92871 262 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 ZDHHC12Q96GR4 267 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 PKP4Q99569 1192 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 IGKV6-21A0A0C4DH24 114 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 TULP3O75386 442 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 GSRP00390 522 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 ACVR2AP27037 513 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 DECR1Q16698 335 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 LRRTM3Q86VH5 581 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 KBTBD7Q8WVZ9 684 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 RAB7BQ96AH8 199 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 TMEM125Q96AQ2 219 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 SH3YL1Q96HL8 342 aaPredicted RBP17.93■□□□□ 0.46
CLIP2-201ENST00000223398 COX4I2Q96KJ9 171 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 IL17FQ96PD4 163 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 OR52B2Q96RD2 323 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 CHID1Q9BWS9 393 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 TBC1D17Q9HA65 648 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 NKIRAS2Q9NYR9 191 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 C19orf25Q9UFG5 118 aaPredicted RBP17.93■□□□□ 0.46
CLIP2-201ENST00000223398 GIMAP2Q9UG22 337 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 ACSL5Q9ULC5 683 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 TEX264Q9Y6I9 313 aa17.93■□□□□ 0.46
CLIP2-201ENST00000223398 OAZ2O95190 189 aa17.92■□□□□ 0.46
CLIP2-201ENST00000223398 NADKO95544 446 aaPredicted RBP17.92■□□□□ 0.46
CLIP2-201ENST00000223398 GPIP06744 558 aa17.92■□□□□ 0.46
CLIP2-201ENST00000223398 NR4A1P22736 598 aa17.92■□□□□ 0.46
CLIP2-201ENST00000223398 TMPRSS9Q7Z410 1059 aa17.92■□□□□ 0.46
CLIP2-201ENST00000223398 GPR22Q99680 433 aa17.92■□□□□ 0.46
CLIP2-201ENST00000223398 PSAT1Q9Y617 370 aa17.92■□□□□ 0.46
CLIP2-201ENST00000223398 DNAJC25-GNG10A0A024R161 153 aa17.92■□□□□ 0.46
CLIP2-201ENST00000223398 LATO43561 262 aa17.92■□□□□ 0.46
CLIP2-201ENST00000223398 COQ9O75208 318 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms