RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 FADS2O95864 444 aaKnown RBP12.9□□□□□ -0.35
SRP54-201ENST00000216774 NTRK1P04629 796 aa12.9□□□□□ -0.35
SRP54-201ENST00000216774 CYP2A7P20853 494 aa12.9□□□□□ -0.35
SRP54-201ENST00000216774 WNT3P56703 355 aa12.9□□□□□ -0.35
SRP54-201ENST00000216774 VBP1P61758 197 aa12.9□□□□□ -0.35
SRP54-201ENST00000216774 HSPA14Q0VDF9 509 aa12.9□□□□□ -0.35
SRP54-201ENST00000216774 INAQ16352 499 aa12.9□□□□□ -0.35
SRP54-201ENST00000216774 UGT8Q16880 541 aa12.9□□□□□ -0.35
SRP54-201ENST00000216774 PLEKHS1Q5SXH7 462 aa12.9□□□□□ -0.35
SRP54-201ENST00000216774 CCDC81Q6ZN84 652 aa12.9□□□□□ -0.35
SRP54-201ENST00000216774 VTCN1Q7Z7D3 282 aa12.9□□□□□ -0.35
SRP54-201ENST00000216774 ATG16L2Q8NAA4 619 aa12.9□□□□□ -0.35
SRP54-201ENST00000216774 SKA2Q8WVK7 121 aaPredicted RBP12.9□□□□□ -0.35
SRP54-201ENST00000216774 BHMTQ93088 406 aa12.9□□□□□ -0.35
SRP54-201ENST00000216774 SIGLEC11Q96RL6 698 aa12.9□□□□□ -0.35
SRP54-201ENST00000216774 SLC22A12Q96S37 553 aa12.9□□□□□ -0.35
SRP54-201ENST00000216774 EPYCQ99645 322 aa12.9□□□□□ -0.35
SRP54-201ENST00000216774 THUMPD1Q9NXG2 353 aaKnown RBP12.9□□□□□ -0.35
SRP54-201ENST00000216774 PMF1-BGLAPU3KQ54 211 aa12.9□□□□□ -0.35
SRP54-201ENST00000216774 PIKFYVEQ9Y2I7 2098 aa12.89□□□□□ -0.35
SRP54-201ENST00000216774 ANAPC1Q9H1A4 1944 aa12.89□□□□□ -0.35
SRP54-201ENST00000216774 CXorf51AA0A1B0GTR3 108 aa12.89□□□□□ -0.35
SRP54-201ENST00000216774 OR2A25A4D2G3 310 aa12.89□□□□□ -0.35
SRP54-201ENST00000216774 TMEM247A6NEH6 219 aa12.89□□□□□ -0.35
SRP54-201ENST00000216774 OLFM2O95897 454 aa12.89□□□□□ -0.35
SRP54-201ENST00000216774 C9P02748 559 aa12.89□□□□□ -0.35
SRP54-201ENST00000216774 KRT20P35900 424 aa12.89□□□□□ -0.35
SRP54-201ENST00000216774 NPRL3Q12980 569 aa12.89□□□□□ -0.35
SRP54-201ENST00000216774 DGCR6Q14129 220 aa12.89□□□□□ -0.35
SRP54-201ENST00000216774 DGKKQ5KSL6 1271 aa12.89□□□□□ -0.35
SRP54-201ENST00000216774 MPP7Q5T2T1 576 aa12.89□□□□□ -0.35
SRP54-201ENST00000216774 UBE2UQ5VVX9 321 aa12.89□□□□□ -0.35
SRP54-201ENST00000216774 LIPJQ5W064 366 aa12.89□□□□□ -0.35
SRP54-201ENST00000216774 ZNF621Q6ZSS3 439 aa12.89□□□□□ -0.35
SRP54-201ENST00000216774 DNAJB7Q7Z6W7 309 aaPredicted RBP12.89□□□□□ -0.35
SRP54-201ENST00000216774 SLC22A15Q8IZD6 547 aa12.89□□□□□ -0.35
SRP54-201ENST00000216774 FCGR1BQ92637 280 aa12.89□□□□□ -0.35
SRP54-201ENST00000216774 PYCR2Q96C36 320 aa12.89□□□□□ -0.35
SRP54-201ENST00000216774 ECHDC3Q96DC8 303 aa12.89□□□□□ -0.35
SRP54-201ENST00000216774 METTL2AQ96IZ6 378 aaKnown RBP12.89□□□□□ -0.35
SRP54-201ENST00000216774 MCCC1Q96RQ3 725 aaPredicted RBP12.89□□□□□ -0.35
SRP54-201ENST00000216774 GABARAPL3Q9BY60 117 aa12.89□□□□□ -0.35
SRP54-201ENST00000216774 SLC22A14Q9Y267 594 aa12.89□□□□□ -0.35
SRP54-201ENST00000216774 KPNA5O15131 536 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 PRAMEF4O60810 478 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 BMP4P12644 408 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 COX7A2P14406 83 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 HALP42357 657 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 SNRPD1P62314 119 aaKnown RBP12.88□□□□□ -0.35
SRP54-201ENST00000216774 ZXDBP98169 803 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 PTSQ03393 145 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 CHIT1Q13231 466 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 KCNC3Q14003 757 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 SMN1Q16637 294 aaKnown RBP12.88□□□□□ -0.35
SRP54-201ENST00000216774 PAGE2BQ5JRK9 111 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 PERM1Q5SV97 790 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 PRAMEF9Q5VWM5 478 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 CCDC71Q8IV32 467 aaPredicted RBP12.88□□□□□ -0.35
SRP54-201ENST00000216774 SYNPOQ8N3V7 929 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 LGALS12Q96DT0 336 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 P2RY13Q9BPV8 354 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 BTBD2Q9BX70 525 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 RNF186Q9NXI6 227 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 KIAA1522Q9P206 1035 aaPredicted RBP12.88□□□□□ -0.35
SRP54-201ENST00000216774 VPS29Q9UBQ0 182 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 AASSQ9UDR5 926 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 CORO2BQ9UQ03 480 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 RUVBL1Q9Y265 456 aaKnown RBP12.88□□□□□ -0.35
SRP54-201ENST00000216774 PCDHB11Q9Y5F2 797 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 WBP4O75554 376 aaKnown RBP12.88□□□□□ -0.35
SRP54-201ENST00000216774 DIRAS1O95057 198 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 TGM1P22735 817 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 PPIBP23284 216 aaKnown RBP12.88□□□□□ -0.35
SRP54-201ENST00000216774 ITPKAP23677 461 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 EPHA2P29317 976 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 ALDH4A1P30038 563 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 RXRGP48443 463 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 LSM3P62310 102 aaKnown RBP12.88□□□□□ -0.35
SRP54-201ENST00000216774 RPP38P78345 283 aaKnown RBP12.88□□□□□ -0.35
SRP54-201ENST00000216774 CAP1Q01518 475 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 IFITM3Q01628 133 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 LMAN2Q12907 356 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 CAMK2GQ13555 558 aaPredicted RBP12.88□□□□□ -0.35
SRP54-201ENST00000216774 ARL14EPQ8N8R7 260 aaPredicted RBP12.88□□□□□ -0.35
SRP54-201ENST00000216774 VOPP1Q96AW1 172 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 IGSF21Q96ID5 467 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 HRASLS5Q96KN8 279 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 RHNO1Q9BSD3 238 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 EBPLQ9BY08 206 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 CEP44Q9C0F1 390 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 SLIRPQ9GZT3 109 aaKnown RBP12.88□□□□□ -0.35
SRP54-201ENST00000216774 INIPQ9NRY2 104 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 SPATA6Q9NWH7 488 aaPredicted RBP12.88□□□□□ -0.35
SRP54-201ENST00000216774 OSGIN1Q9UJX0 560 aa12.88□□□□□ -0.35
SRP54-201ENST00000216774 LSM7Q9UK45 103 aaKnown RBP12.88□□□□□ -0.35
SRP54-201ENST00000216774 KIAA1671Q9BY89 1806 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.87□□□□□ -0.35
SRP54-201ENST00000216774 TTC34A8MYJ7 566 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 PCDHGA12O60330 932 aa12.87□□□□□ -0.35
SRP54-201ENST00000216774 CD36P16671 472 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms