RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 VAC14Q08AM6 782 aa8.65□□□□□ -1.02
MTHFD1-201ENST00000216605 ABRAXAS2Q15018 415 aa8.65□□□□□ -1.02
MTHFD1-201ENST00000216605 KCNJ8Q15842 424 aa8.65□□□□□ -1.02
MTHFD1-201ENST00000216605 C2orf27AQ580R0 203 aa8.65□□□□□ -1.02
MTHFD1-201ENST00000216605 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.65□□□□□ -1.02
MTHFD1-201ENST00000216605 CARM1Q86X55 608 aa8.65□□□□□ -1.02
MTHFD1-201ENST00000216605 DNAJB14Q8TBM8 379 aa8.65□□□□□ -1.02
MTHFD1-201ENST00000216605 SELENOMQ8WWX9 145 aa8.65□□□□□ -1.02
MTHFD1-201ENST00000216605 ZBTB18Q99592 522 aa8.65□□□□□ -1.02
MTHFD1-201ENST00000216605 CDCA3Q99618 268 aaPredicted RBP8.65□□□□□ -1.02
MTHFD1-201ENST00000216605 TRMT61BQ9BVS5 477 aaKnown RBP8.65□□□□□ -1.02
MTHFD1-201ENST00000216605 ZCCHC2Q9C0B9 1178 aaKnown RBP8.65□□□□□ -1.02
MTHFD1-201ENST00000216605 LMAN2LQ9H0V9 348 aa8.65□□□□□ -1.02
MTHFD1-201ENST00000216605 PCDHAC1Q9H158 963 aa8.65□□□□□ -1.02
MTHFD1-201ENST00000216605 SPAG4Q9NPE6 437 aa8.65□□□□□ -1.02
MTHFD1-201ENST00000216605 PCDHGA8Q9Y5G5 932 aa8.65□□□□□ -1.02
MTHFD1-201ENST00000216605 TMEM202A6NGA9 273 aa8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 B8ZZF3 427 aa8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 QSOX1O00391 747 aa8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 CATP04040 527 aaKnown RBP8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 GPX3P22352 226 aa8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 CLK3P49761 638 aaKnown RBP8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 ERVK-8P63133 956 aa8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 RHDQ02161 417 aa8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 STARD3Q14849 445 aa8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 ZBED5Q49AG3 693 aa8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 C6orf136Q5SQH8 315 aa8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 C6orf10Q5SRN2 563 aa8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 PLEKHS1Q5SXH7 462 aa8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 HENMT1Q5T8I9 393 aaKnown RBP8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 NIPAL1Q6NVV3 410 aa8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 PARM1Q6UWI2 310 aa8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 ZBTB49Q6ZSB9 765 aa8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 ERN2Q76MJ5 926 aaKnown RBP8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 LILRA3Q8N6C8 439 aaPredicted RBP8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 RASGEF1AQ8N9B8 481 aa8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 OR2T11Q8NH01 316 aa8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 ANGPTL6Q8NI99 470 aa8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 KLK6Q92876 244 aa8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 FOXJ1Q92949 421 aa8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 PPWD1Q96BP3 646 aaKnown RBP8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 C19orf43Q9BQ61 176 aa8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 PLA2G2FQ9BZM2 168 aa8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 SEMA6AQ9H2E6 1030 aa8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 SLC32A1Q9H598 525 aa8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 OLAHQ9NV23 265 aa8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 ZIM2Q9NZV7 527 aa8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 EIF3LQ9Y262 564 aaKnown RBP8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 SNX13Q9Y5W8 968 aa8.65□□□□□ -1.03
MTHFD1-201ENST00000216605 OR5K4A6NMS3 321 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 AGAP14A8MT82 685 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 H3BM21 787 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 CLDN9O95484 217 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 PCCBP05166 539 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 C8BP07358 591 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 ITGB7P26010 798 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 TTKP33981 857 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 FAM46CQ5VWP2 391 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 SYTL1Q8IYJ3 562 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 CSGALNACT1Q8TDX6 532 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 BORCS5Q969J3 196 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 MRPL38Q96DV4 380 aaKnown RBP8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 METTL2AQ96IZ6 378 aaKnown RBP8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 MYADMQ96S97 322 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 P2RY13Q9BPV8 354 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 CCM2Q9BSQ5 444 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 RPP25Q9BUL9 199 aaKnown RBP8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 C1QTNF3Q9BXJ4 246 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 TRIM8Q9BZR9 551 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 PAIP1Q9H074 479 aaKnown RBP8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 KCNN3Q9UGI6 736 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 GOLGA4Q13439 2230 aaKnown RBP8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 K7ESM1 405 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 RNGTTO60942 597 aaKnown RBP8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 OR5F1O95221 314 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 PTGS2P35354 604 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 BDKRB1P46663 353 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 POLR2JP52435 117 aaKnown RBP8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 IRF8Q02556 426 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 HYAL1Q12794 435 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 NAE1Q13564 534 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 SF3B4Q15427 424 aaKnown RBP eCLIP8.64□□□□□ -1.032e-7■■■□□ 19.1
MTHFD1-201ENST00000216605 ZNF829Q3KNS6 432 aaPredicted RBP8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 ITPRIPL2Q3MIP1 535 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 METTL11BQ5VVY1 283 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 ANKRD54Q6NXT1 300 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 FAM122CQ6P4D5 195 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 SYCE2Q6PIF2 218 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 CLHC1Q8NHS4 586 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 HMGCLL1Q8TB92 370 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 LRTOMTQ8WZ04 291 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 VPS35Q96QK1 796 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 SERINC2Q96SA4 455 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 RUBCNLQ9H714 662 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 SUCOQ9UBS9 1254 aaKnown RBP8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 HELZP42694 1942 aaKnown RBP8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 ALPK3Q96L96 1907 aa8.64□□□□□ -1.03
MTHFD1-201ENST00000216605 A0A1B0GTW7 788 aa8.63□□□□□ -1.03
MTHFD1-201ENST00000216605 AP2A2O94973 939 aa8.63□□□□□ -1.03
MTHFD1-201ENST00000216605 G6PDP11413 515 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms