RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 CXCL14O95715 111 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 SLC1A2P43004 574 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 DGKEP52429 567 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 GABARAPL2P60520 117 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 S100A10P60903 97 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 ST3GAL4Q11206 333 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 RFTN1Q14699 578 aaPredicted RBP10.18□□□□□ -0.78
VCL-201ENST00000211998 FAM198BQ6UWH4 519 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 PAMR1Q6UXH9 720 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 PSD4Q8NDX1 1056 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 NDNFQ8TB73 568 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 ACOT12Q8WYK0 555 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 PMM1Q92871 262 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 CLP1Q92989 425 aaKnown RBP10.18□□□□□ -0.78
VCL-201ENST00000211998 PTERQ96BW5 349 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 COQ10AQ96MF6 247 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 TPT1P8Q9HAU6 139 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 ERVK-19Q9WJR5 959 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 A8MT66 165 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 TLL1O43897 1013 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 CREG1O75629 220 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 T-ENOLP0DO92 83 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 FGF3P11487 239 aaPredicted RBP10.18□□□□□ -0.78
VCL-201ENST00000211998 EPCAMP16422 314 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 UFM1P61960 85 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 AIMP2Q13155 320 aaKnown RBP10.18□□□□□ -0.78
VCL-201ENST00000211998 TARBP2Q15633 366 aaKnown RBP10.18□□□□□ -0.78
VCL-201ENST00000211998 KBTBD6Q86V97 674 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 SDR16C5Q8N3Y7 309 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 FTMTQ8N4E7 242 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 CPA6Q8N4T0 437 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 ZFP90Q8TF47 636 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 GTF2H4Q92759 462 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 MAPKAP1Q9BPZ7 522 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 TTLL2Q9BWV7 592 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 MMP28Q9H239 520 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 EQTNQ9NQ60 294 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 B3GNT3Q9Y2A9 372 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 SLIT3O75094 1523 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 A0A1W2PP18 115 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 F5H0A9 414 aaPredicted RBP10.18□□□□□ -0.78
VCL-201ENST00000211998 OR1I1O60431 355 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 ARHGEF15O94989 841 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 H2AFB2P0C5Z0 115 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 CTPS1P17812 591 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 GADD45AP24522 165 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 GABRR2P28476 465 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 SLC5A2P31639 672 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 RGS8P57771 180 aaPredicted RBP10.18□□□□□ -0.78
VCL-201ENST00000211998 MC1RQ01726 317 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 SNTA1Q13424 505 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 PTGR1Q14914 329 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 SPATS1Q496A3 300 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 CRB2Q5IJ48 1285 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 ZNF311Q5JNZ3 666 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 NOL9Q5SY16 702 aaKnown RBP10.18□□□□□ -0.78
VCL-201ENST00000211998 GPRC6AQ5T6X5 926 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 VWA5B2Q8N398 1253 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 FERD3LQ96RJ6 166 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 PLEKHA6Q9Y2H5 1048 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 A0A1W2PRQ8 180 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 C2orf74A8MZ97 194 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 LRRN3E7EW58 273 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 CLDN5O00501 218 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 SLC25A14O95258 325 aaPredicted RBP10.18□□□□□ -0.78
VCL-201ENST00000211998 SRPRAP08240 638 aaKnown RBP10.18□□□□□ -0.78
VCL-201ENST00000211998 RPS2P15880 293 aaKnown RBP10.18□□□□□ -0.78
VCL-201ENST00000211998 SELPP16109 830 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 VAMP1P23763 118 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 PLA2G16P53816 162 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 HSDL1Q3SXM5 330 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 LRRC37A5PQ49AS3 106 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 INTS6LQ5JSJ4 861 aaKnown RBP10.18□□□□□ -0.78
VCL-201ENST00000211998 BORAQ6PGQ7 559 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 OR4K2Q8NGD2 314 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 CIDECQ96AQ7 238 aaPredicted RBP10.18□□□□□ -0.78
VCL-201ENST00000211998 LGR4Q9BXB1 951 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 LRRN3Q9H3W5 708 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 ZNF334Q9HCZ1 680 aaPredicted RBP10.18□□□□□ -0.78
VCL-201ENST00000211998 TAS2R10Q9NYW0 307 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 ZIM2Q9NZV7 527 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 HEMK1Q9Y5R4 338 aaPredicted RBP10.18□□□□□ -0.78
VCL-201ENST00000211998 ZNF780BQ9Y6R6 833 aa10.18□□□□□ -0.78
VCL-201ENST00000211998 SLC35F4A4IF30 521 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 KMOO15229 486 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 RFPL3O75679 317 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 PROS1P07225 676 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 CASP9P55211 416 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 SRSF11Q05519 484 aaKnown RBP10.17□□□□□ -0.78
VCL-201ENST00000211998 SLC3A1Q07837 685 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 TOMM20Q15388 145 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 CRY2Q49AN0 593 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 ATCAYQ86WG3 371 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 SEZ6LQ9BYH1 1024 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 COMMD4Q9H0A8 199 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 MTG2Q9H4K7 406 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 AGO3Q9H9G7 860 aaKnown RBP10.17□□□□□ -0.78
VCL-201ENST00000211998 FBXL3Q9UKT7 428 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 TEX264Q9Y6I9 313 aa10.17□□□□□ -0.78
VCL-201ENST00000211998 SLC25A12O75746 678 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms