RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 HAUS8Q9BT25 410 aa18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 EFCAB11Q9BUY7 163 aa18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 SPATA6Q9NWH7 488 aaPredicted RBP18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 TAC3Q9UHF0 121 aa18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 NDUFAF1Q9Y375 327 aa18.98■□□□□ 0.63
TNFRSF1A-201ENST00000162749 A0A1W2PP18 115 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 MAGEB17A8MXT2 336 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 RASGRP1O95267 797 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 XRCC1P18887 633 aaPredicted RBP18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 MSX2P35548 267 aaPredicted RBP18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 RAB28P51157 221 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 SLBPQ14493 270 aaKnown RBP eCLIP18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 LPCAT4Q643R3 524 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 MED27Q6P2C8 311 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 NXPE4Q6UWF7 544 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 ABRAXAS1Q6UWZ7 409 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 HID1Q8IV36 788 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 LIX1Q8N485 282 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 SPEM1Q8N4L4 309 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 HUS1BQ8NHY5 278 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 CMTM7Q96FZ5 175 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 APIPQ96GX9 242 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 SPNS1Q9H2V7 528 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 MVB12BQ9H7P6 319 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 CAAP1Q9H8G2 361 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 MAP10Q9P2G4 905 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 DLGAP4Q9Y2H0 992 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 PCDHGA7Q9Y5G6 932 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 PRAMEF33A0A0G2JMD5 474 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 A0A1W2PPV9 198 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 PIPSLA2A3N6 862 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 FAM234BA2RU67 622 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 ASPDHA6ND91 283 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 ZNF839A8K0R7 811 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 MTHFD1P11586 935 aaKnown RBP18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 BCKDHAP12694 445 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 ACTR1BP42025 376 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 ACTR1AP61163 376 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 MS4A2Q01362 244 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 USP39Q53GS9 565 aaKnown RBP18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 CACHD1Q5VU97 1274 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 SLC30A9Q6PML9 568 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 PCYOX1LQ8NBM8 494 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 SMPDL3AQ92484 453 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 SNX19Q92543 992 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 CLDN23Q96B33 292 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 BRF2Q9HAW0 419 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 GPR27Q9NS67 375 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 TRNAU1APQ9NX07 287 aaKnown RBP18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 VPS29Q9UBQ0 182 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 PCOLCE2Q9UKZ9 415 aa18.97■□□□□ 0.63
TNFRSF1A-201ENST00000162749 CDH1P12830 882 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 PSMB5P28074 263 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 NUDT1P36639 197 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 MRPS35P82673 323 aaKnown RBP18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 MEF2AQ02078 507 aaPredicted RBP18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 MTAPQ13126 283 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 KRT33BQ14525 404 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 COQ5Q5HYK3 327 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 PAGE2BQ5JRK9 111 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 C8orf82Q6P1X6 216 aaPredicted RBP18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 LAYNQ6UX15 382 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 WASH2PQ6VEQ5 465 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 HACD2Q6Y1H2 254 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 LAS2Q8IYD9 372 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 UBALD2Q8IYN6 164 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 RNF148Q8N7C7 305 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 OR52E1Q8NGJ3 308 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 NUDT8Q8WV74 236 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 ROPN1LQ96C74 230 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 WASH6PQ9NQA3 447 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 TMED5Q9Y3A6 229 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 DGKBQ9Y6T7 804 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 STK25O00506 426 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 ETHE1O95571 254 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 PCNAP12004 261 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 HSD3B1P14060 373 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 AMD1P17707 334 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 HSD3B2P26439 372 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 PSME3P61289 254 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 LRRC36Q1X8D7 754 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 TIGD2Q4W5G0 525 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 RAB42Q8N4Z0 105 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 SH3KBP1Q96B97 665 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 APOLD1Q96LR9 279 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 SLC39A3Q9BRY0 314 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 XKR8Q9H6D3 395 aa18.96■□□□□ 0.63
TNFRSF1A-201ENST00000162749 SPTY2D1-AS1A0A0U1RR47 76 aa18.95■□□□□ 0.62
TNFRSF1A-201ENST00000162749 CCDC154A6NI56 674 aa18.95■□□□□ 0.62
TNFRSF1A-201ENST00000162749 THEGLP0DJG4 465 aa18.95■□□□□ 0.62
TNFRSF1A-201ENST00000162749 C17orf64Q86WR6 236 aa18.95■□□□□ 0.62
TNFRSF1A-201ENST00000162749 FAM129CQ86XR2 697 aa18.95■□□□□ 0.62
TNFRSF1A-201ENST00000162749 ZNF740Q8NDX6 193 aa18.95■□□□□ 0.62
TNFRSF1A-201ENST00000162749 GATA6Q92908 595 aa18.95■□□□□ 0.62
TNFRSF1A-201ENST00000162749 REPS1Q96D71 796 aa18.95■□□□□ 0.62
TNFRSF1A-201ENST00000162749 PCBD2Q9H0N5 130 aa18.95■□□□□ 0.62
TNFRSF1A-201ENST00000162749 HEBP2Q9Y5Z4 205 aa18.95■□□□□ 0.62
TNFRSF1A-201ENST00000162749 BDP1A6H8Y1 2624 aa18.95■□□□□ 0.62
TNFRSF1A-201ENST00000162749 VPS13AQ96RL7 3174 aa18.95■□□□□ 0.62
TNFRSF1A-201ENST00000162749 A6NCN8 305 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms