RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 IFT52Q9Y366 437 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.25■□□□□ 0.19
CTDP1-201ENST00000075430 MANBAO00462 879 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 TNFRSF10BO14763 440 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 SOX3P41225 446 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 KIR3DL1P43629 444 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 TUFMP49411 452 aaKnown RBP16.25■□□□□ 0.19
CTDP1-201ENST00000075430 ZNF177Q13360 481 aaPredicted RBP16.25■□□□□ 0.19
CTDP1-201ENST00000075430 ACOX1Q15067 660 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 ADNP2Q6IQ32 1131 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 GPR65Q8IYL9 337 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 OR4K1Q8NGD4 311 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 CNDP2Q96KP4 475 aaKnown RBP16.25■□□□□ 0.19
CTDP1-201ENST00000075430 CCM2Q9BSQ5 444 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 CTPS2Q9NRF8 586 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 LRFN2Q9ULH4 789 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 PIKFYVEQ9Y2I7 2098 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 WBP4O75554 376 aaKnown RBP16.25■□□□□ 0.19
CTDP1-201ENST00000075430 STK16O75716 305 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 EPN2O95208 641 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 PRLP01236 227 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 PRKAR2AP13861 404 aaKnown RBP16.25■□□□□ 0.19
CTDP1-201ENST00000075430 SLC15A1P46059 708 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 NEK5Q6P3R8 708 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 SLC5A8Q8N695 610 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 TRIM62Q9BVG3 475 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 PRDM5Q9NQX1 630 aaPredicted RBP16.25■□□□□ 0.19
CTDP1-201ENST00000075430 ACSL6Q9UKU0 697 aa16.25■□□□□ 0.19
CTDP1-201ENST00000075430 GNG14A0A1W2PPG7 69 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 LRRTM2O43300 516 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 IL6P05231 212 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 RPIAP49247 311 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 PRKCZQ05513 592 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 POM121L1PQ3SYA9 428 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 ATAD3CQ5T2N8 411 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 KIAA1841Q6NSI8 718 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 RFLNAQ6ZTI6 216 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 GPR149Q86SP6 731 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 CDADC1Q9BWV3 514 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 DUSP21Q9H596 190 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 OLA1Q9NTK5 396 aaKnown RBP16.24■□□□□ 0.19
CTDP1-201ENST00000075430 MS4A12Q9NXJ0 267 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 PPT2Q9UMR5 302 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 A0A0U1RQF3 1178 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 M0R082 166 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 KRT6AP02538 564 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 KRT6BP04259 564 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 HOXA9P31269 272 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 DNAJA1P31689 397 aaKnown RBP16.24■□□□□ 0.19
CTDP1-201ENST00000075430 KDELR2P33947 212 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 PPP3CCP48454 512 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 KRT6CP48668 564 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 TAF1AQ15573 450 aaPredicted RBP16.24■□□□□ 0.19
CTDP1-201ENST00000075430 RFX4Q33E94 735 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 LRRC49Q8IUZ0 686 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 ASIC4Q96FT7 647 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 PCDHB5Q9Y5E4 795 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 TNFRSF11BO00300 401 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 RPLP0P05388 317 aaKnown RBP16.24■□□□□ 0.19
CTDP1-201ENST00000075430 SLAMF1Q13291 335 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 INO80DQ53TQ3 878 aaPredicted RBP16.24■□□□□ 0.19
CTDP1-201ENST00000075430 SYT6Q5T7P8 510 aaPredicted RBP16.24■□□□□ 0.19
CTDP1-201ENST00000075430 CST9Q5W186 159 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 PAMR1Q6UXH9 720 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 CCDC117Q8IWD4 279 aaPredicted RBP16.24■□□□□ 0.19
CTDP1-201ENST00000075430 SLC34A3Q8N130 599 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 PCNPQ8WW12 178 aaKnown RBP16.24■□□□□ 0.19
CTDP1-201ENST00000075430 IRF2BPLQ9H1B7 796 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 TOR4AQ9NXH8 423 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 SAMD4AQ9UPU9 718 aaKnown RBP16.24■□□□□ 0.19
CTDP1-201ENST00000075430 NEUROG3Q9Y4Z2 214 aa16.24■□□□□ 0.19
CTDP1-201ENST00000075430 TNPO3Q9Y5L0 923 aaKnown RBP16.24■□□□□ 0.19
CTDP1-201ENST00000075430 TRIM64BA6NI03 449 aa16.23■□□□□ 0.19
CTDP1-201ENST00000075430 ARNTLO00327 626 aa16.23■□□□□ 0.19
CTDP1-201ENST00000075430 DSCR3O14972 297 aa16.23■□□□□ 0.19
CTDP1-201ENST00000075430 KMOO15229 486 aa16.23■□□□□ 0.19
CTDP1-201ENST00000075430 SOAT1P35610 550 aa16.23■□□□□ 0.19
CTDP1-201ENST00000075430 PIK3CBP42338 1070 aa16.23■□□□□ 0.19
CTDP1-201ENST00000075430 GON4LQ3T8J9 2241 aa16.23■□□□□ 0.19
CTDP1-201ENST00000075430 IER5LQ5T953 404 aa16.23■□□□□ 0.19
CTDP1-201ENST00000075430 MEX3DQ86XN8 651 aaKnown RBP16.23■□□□□ 0.19
CTDP1-201ENST00000075430 STK40Q8N2I9 435 aa16.23■□□□□ 0.19
CTDP1-201ENST00000075430 PJA1Q8NG27 643 aa16.23■□□□□ 0.19
CTDP1-201ENST00000075430 CRISPLD1Q9H336 500 aa16.23■□□□□ 0.19
CTDP1-201ENST00000075430 RPRD1BQ9NQG5 326 aaKnown RBP16.23■□□□□ 0.19
CTDP1-201ENST00000075430 NUDT4Q9NZJ9 180 aa16.23■□□□□ 0.19
CTDP1-201ENST00000075430 ITGB1BP2Q9UKP3 347 aa16.23■□□□□ 0.19
CTDP1-201ENST00000075430 SMLR1H3BR10 107 aa16.23■□□□□ 0.19
CTDP1-201ENST00000075430 TYSND1Q2T9J0 566 aa16.23■□□□□ 0.19
CTDP1-201ENST00000075430 SHQ1Q6PI26 577 aaKnown RBP16.23■□□□□ 0.19
CTDP1-201ENST00000075430 GLCCI1Q86VQ1 547 aa16.23■□□□□ 0.19
CTDP1-201ENST00000075430 TAGAPQ8N103 731 aa16.23■□□□□ 0.19
CTDP1-201ENST00000075430 TP53I13Q8NBR0 393 aaPredicted RBP16.23■□□□□ 0.19
CTDP1-201ENST00000075430 PHF10Q8WUB8 498 aaKnown RBP16.23■□□□□ 0.19
CTDP1-201ENST00000075430 UPF1Q92900 1129 aaKnown RBP eCLIP16.23■□□□□ 0.196e-6■■■■□ 21.9
CTDP1-201ENST00000075430 CLIP3Q96DZ5 547 aa16.23■□□□□ 0.19
CTDP1-201ENST00000075430 TCF25Q9BQ70 676 aa16.23■□□□□ 0.19
CTDP1-201ENST00000075430 PSD2Q9BQI7 771 aa16.23■□□□□ 0.19
CTDP1-201ENST00000075430 RANGRFQ9HD47 186 aaPredicted RBP16.23■□□□□ 0.19
CTDP1-201ENST00000075430 PCM1Q15154 2024 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms