RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 IDH2P48735 452 aaKnown RBP13.6□□□□□ -0.23
USH1C-201ENST00000005226 PCYT1AP49585 367 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 IRF5Q13568 498 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 UGT8Q16880 541 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 TIGD6Q17RP2 521 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 TRIM71Q2Q1W2 868 aaKnown RBP13.6□□□□□ -0.23
USH1C-201ENST00000005226 PTCHD3Q3KNS1 767 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 ADGRF1Q5T601 910 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 DESI1Q6ICB0 168 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 ADNP2Q6IQ32 1131 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 NOXRED1Q6NXP6 359 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 ZSWIM9Q86XI8 627 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 P3H2Q8IVL5 708 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 CCDC103Q8IW40 242 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 CAPSLQ8WWF8 208 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 MTERF1Q99551 399 aaKnown RBP13.6□□□□□ -0.23
USH1C-201ENST00000005226 ROGDIQ9GZN7 287 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 SLC32A1Q9H598 525 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 MARCH5Q9NX47 278 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 PDE4DIPQ5VU43 2346 aa13.6□□□□□ -0.23
USH1C-201ENST00000005226 AGAP5A6NIR3 686 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 METTL15A6NJ78 407 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 OR6C75A6NL08 312 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 LAMP1P11279 417 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 CYBAP13498 195 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 IL1RNP18510 177 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 RRM2P31350 389 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 PPP3CCP48454 512 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 SLC11A1P49279 550 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 WNT3P56703 355 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 BCL2A1Q16548 175 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 HECTD3Q5T447 861 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 UBE2R2Q712K3 238 aaPredicted RBP13.59□□□□□ -0.23
USH1C-201ENST00000005226 SYT12Q8IV01 421 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 C2orf69Q8N8R5 385 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 GPR26Q8NDV2 337 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 SPATA17Q96L03 361 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 CHCHD6Q9BRQ6 235 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 CENPOQ9BU64 300 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 ASIC5Q9NY37 505 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 TMEM189-UBE2V1I3L0A0 370 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 TLL1O43897 1013 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 MTX2O75431 263 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 IGHA2P01877 340 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 POU2F1P14859 743 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 OR1E2P47887 323 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 DUOXA1Q1HG43 343 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 CELF2-AS1Q8N7Q2 184 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 GGHQ92820 318 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 NELL1Q92832 810 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 SH3KBP1Q96B97 665 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 FEVQ99581 238 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 BCL7BQ9BQE9 202 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 CDADC1Q9BWV3 514 aa13.59□□□□□ -0.23
USH1C-201ENST00000005226 ADAMTS4O75173 837 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 RFPL2O75678 378 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 SEMG1P04279 462 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 ABCB1P08183 1280 aaPredicted RBP13.58□□□□□ -0.24
USH1C-201ENST00000005226 PRPS2P11908 318 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 CKBP12277 381 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 COX7A2P14406 83 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 AMD1P17707 334 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 RPS3P23396 243 aaKnown RBP eCLIP13.58□□□□□ -0.24
USH1C-201ENST00000005226 CCND3P30281 292 aaPredicted RBP13.58□□□□□ -0.24
USH1C-201ENST00000005226 SMU1Q2TAY7 513 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 PROX2Q3B8N5 592 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 LRIT3Q3SXY7 679 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 IQCCQ4KMZ1 466 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 TPRG1LQ5T0D9 272 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 DEPDC1Q5TB30 811 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 C17orf99Q6UX52 265 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 AKAP14Q86UN6 197 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 FAM124AQ86V42 546 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 NLGN4XQ8N0W4 816 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 PARP16Q8N5Y8 322 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 SIGLEC11Q96RL6 698 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 AP3M1Q9Y2T2 418 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 KCNE1BA0A087WTH5 132 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 CLDN24A6NM45 220 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 MAGEB17A8MXT2 336 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 GFRA2O00451 464 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 SCN2BO60939 215 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 EPN2O95208 641 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 CTSKP43235 329 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 FADDQ13158 208 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 UBE2UQ5VVX9 321 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 FUT10Q6P4F1 479 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 CBLL1Q75N03 491 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 EIF3MQ7L2H7 374 aaKnown RBP13.58□□□□□ -0.24
USH1C-201ENST00000005226 CYP2U1Q7Z449 544 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 TSEN54Q7Z6J9 526 aaKnown RBP13.58□□□□□ -0.24
USH1C-201ENST00000005226 SERPINA11Q86U17 422 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 SPPL2AQ8TCT8 520 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 BCL7CQ8WUZ0 217 aaPredicted RBP13.58□□□□□ -0.24
USH1C-201ENST00000005226 FOXJ1Q92949 421 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 CEP295NLQ96MC4 621 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 SLC22A12Q96S37 553 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 SLC29A3Q9BZD2 475 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 TMED5Q9Y3A6 229 aa13.58□□□□□ -0.24
USH1C-201ENST00000005226 HSPE1-MOB4S4R3N1 261 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms