RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Mmp7Q10738 264 aa9.6□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Fcho2Q3UQN2 809 aa9.6□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Fbxl19Q6PB97 674 aa9.6□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 ZfatQ7TS63 1237 aa9.6□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Arhgap29Q8CGF1 1266 aa9.6□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Olfr351Q8VGK1 310 aa9.6□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Tmco1Q921L3 188 aaKnown RBP9.6□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Lsm12Q9D0R8 195 aa9.6□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Slc28a3Q9ERH8 703 aa9.6□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Gm20547B8JJN0 1276 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Gm20390E9PZF0 267 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Best1O88870 551 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 P01654 111 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 P01656 111 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 P03977 111 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 CfbP04186 761 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Nme2Q01768 152 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Serpina3mQ03734 418 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Gm11992Q5SS90 291 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Olfr381Q5SSP0 311 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Adora2bQ60614 332 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Rbl1Q64701 1063 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Zzz3Q6KAQ7 910 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Megf11Q80T91 1091 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Chst8Q8BQ86 417 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Cabcoco1Q8CDT7 208 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Trnt1Q8K1J6 434 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Klrb1fQ8VD98 217 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Tmem114Q9D563 222 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Pfn3Q9DAD6 137 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Arr3Q9EQP6 381 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Dmap1Q9JI44 468 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Il22Q9JJY9 179 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 ItgaxQ9QXH4 1169 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 LipgQ9WVG5 500 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 FrylF8VQ05 3007 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Srp72F8VQC1 671 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Ikzf3O08900 507 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Nrp2O35375 931 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 GzmgP13366 248 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 PlgP20918 812 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 KapP61110 121 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Aldh16a1Q571I9 802 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Eif2s1Q6ZWX6 315 aaKnown RBP9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Rnf38Q8BI21 518 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Sdhaf3Q8BQU3 125 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Slitrk6Q8C110 840 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 SinhcafQ8C8M1 221 aaKnown RBP9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Cela1Q91X79 266 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 AasdhpptQ9CQF6 309 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Acer3Q9D099 267 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Slc52a3Q9D6X5 460 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Spag4Q9JJF2 443 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Lama1P19137 3084 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Spin2dB1B0R2 236 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Clip3B9EHT4 547 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Chst13D3Z6E3 336 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Arg2O08691 354 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Grik2P39087 908 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Osbp2Q5QNQ6 908 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Mocs1Q5RKZ7 636 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Foxs1Q61574 329 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Pofut2Q8VHI3 429 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Gm16286Q9CQX6 220 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Ebna1bp2Q9D903 306 aaKnown RBP9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Tmbim4Q9DA39 238 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Cd302Q9DCG2 228 aa9.59□□□□□ -0.87
Ccdc38-201ENSMUST00000092215 Gm33543A0A1B0GSI5 81 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Olfr839-ps1A0A1D5RMH6 312 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 ChadlE9Q7T7 748 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Zfp212G3X8R7 492 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Zfp607bG3X9H3 648 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Alkal1J3QPP8 127 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Serpinb9eO08806 377 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Dgcr6O35347 198 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Gnpda1O88958 289 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Tango2P54797 276 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Arntl2Q2VPD4 579 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Ap5b1Q3TAP4 876 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 E330014E10RikQ3UL33 481 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 D5Ertd577eQ499F0 481 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Ptk6Q64434 451 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Hist2h2acQ64523 129 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Hist2h2aa1Q6GSS7 130 aaKnown RBP9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Tmc6Q7TN60 810 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Pias2Q8C5D8 621 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Mrpl45Q9D0Q7 306 aaKnown RBP9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Syvn1Q9DBY1 612 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Slc22a4Q9Z306 553 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Abca4O35600 2310 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Fam71e2L7N480 754 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Cbfa2t3O54972 620 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 NagluO88325 739 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Nol9Q3TZX8 714 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 TraddQ3U0V2 310 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Foxk2Q3UCQ1 651 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Pcnx4Q3UVY5 1174 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Ahi1Q8K3E5 1047 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Cops7aQ9CZ04 275 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Armc1Q9D7A8 282 aa9.58□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 33.5 ms